RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
TFRC-202ENST00000392396 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
TFRC-202ENST00000392396 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
TFRC-202ENST00000392396 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
TFRC-202ENST00000392396 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
TFRC-202ENST00000392396 APLP2Q06481 763 aa28.82■■■□□ 2.2
TFRC-202ENST00000392396 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
TFRC-202ENST00000392396 ATP1B4Q9UN42 357 aaPredicted RBP28.02■■■□□ 2.08
TFRC-202ENST00000392396 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
TFRC-202ENST00000392396 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
TFRC-202ENST00000392396 ABCC9O60706 1549 aa27.72■■■□□ 2.03
TFRC-202ENST00000392396 UBTFP17480 764 aaKnown RBP27.72■■■□□ 2.03
TFRC-202ENST00000392396 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
TFRC-202ENST00000392396 MYT1LQ9UL68 1186 aa27.48■■□□□ 1.99
TFRC-202ENST00000392396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
TFRC-202ENST00000392396 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
TFRC-202ENST00000392396 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
TFRC-202ENST00000392396 PELP1Q8IZL8 1130 aaKnown RBP27.17■■□□□ 1.94
TFRC-202ENST00000392396 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
TFRC-202ENST00000392396 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
TFRC-202ENST00000392396 FBLN2P98095 1184 aa26.77■■□□□ 1.88
TFRC-202ENST00000392396 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
TFRC-202ENST00000392396 ZEB1P37275 1124 aaPredicted RBP26.59■■□□□ 1.85
TFRC-202ENST00000392396 ITGAEP38570 1179 aa26.55■■□□□ 1.84
TFRC-202ENST00000392396 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
TFRC-202ENST00000392396 POLR3GLQ9BT43 218 aa26.24■■□□□ 1.79
TFRC-202ENST00000392396 NPM1P06748 294 aaKnown RBP eCLIP26.23■■□□□ 1.79
TFRC-202ENST00000392396 SLC4A1APQ9BWU0 796 aaKnown RBP26.19■■□□□ 1.78
TFRC-202ENST00000392396 SCRIBQ14160 1630 aa26.14■■□□□ 1.77
TFRC-202ENST00000392396 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
TFRC-202ENST00000392396 FAM50AQ14320 339 aaKnown RBP26.09■■□□□ 1.77
TFRC-202ENST00000392396 CENPBP07199 599 aaPredicted RBP26.09■■□□□ 1.77
TFRC-202ENST00000392396 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
TFRC-202ENST00000392396 NEFLP07196 543 aa26.01■■□□□ 1.75
TFRC-202ENST00000392396 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
TFRC-202ENST00000392396 BCANQ96GW7 911 aa25.96■■□□□ 1.75
TFRC-202ENST00000392396 TRIM26Q12899 539 aaPredicted RBP25.93■■□□□ 1.74
TFRC-202ENST00000392396 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
TFRC-202ENST00000392396 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
TFRC-202ENST00000392396 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
TFRC-202ENST00000392396 ARID3CA6NKF2 412 aa25.79■■□□□ 1.72
TFRC-202ENST00000392396 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
TFRC-202ENST00000392396 ERICH6Q7L0X2 663 aa25.77■■□□□ 1.72
TFRC-202ENST00000392396 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
TFRC-202ENST00000392396 ZNF777Q9ULD5 760 aaPredicted RBP25.71■■□□□ 1.71
TFRC-202ENST00000392396 CNGB1Q14028 1251 aaPredicted RBP25.69■■□□□ 1.7
TFRC-202ENST00000392396 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
TFRC-202ENST00000392396 STAG3Q9UJ98 1225 aa25.63■■□□□ 1.69
TFRC-202ENST00000392396 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
TFRC-202ENST00000392396 PLPPR3Q6T4P5 718 aa25.58■■□□□ 1.68
TFRC-202ENST00000392396 ZNF326Q5BKZ1 582 aaKnown RBP25.55■■□□□ 1.68
TFRC-202ENST00000392396 YTHDC1Q96MU7 727 aaKnown RBP25.52■■□□□ 1.68
TFRC-202ENST00000392396 NACADO15069 1562 aa25.49■■□□□ 1.67
TFRC-202ENST00000392396 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
TFRC-202ENST00000392396 NEUROD1Q13562 356 aa25.41■■□□□ 1.66
TFRC-202ENST00000392396 NEFMP07197 916 aa25.39■■□□□ 1.66
TFRC-202ENST00000392396 CHGAP10645 457 aaKnown RBP25.38■■□□□ 1.65
TFRC-202ENST00000392396 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
TFRC-202ENST00000392396 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
TFRC-202ENST00000392396 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
TFRC-202ENST00000392396 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
TFRC-202ENST00000392396 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
TFRC-202ENST00000392396 ZBTB47Q9UFB7 747 aaPredicted RBP25.12■■□□□ 1.61
TFRC-202ENST00000392396 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
TFRC-202ENST00000392396 KCNH8Q96L42 1107 aa25.11■■□□□ 1.61
TFRC-202ENST00000392396 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
TFRC-202ENST00000392396 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
TFRC-202ENST00000392396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.67e-9■■□□□ 12.8
TFRC-202ENST00000392396 CLSPNQ9HAW4 1339 aa25.06■■□□□ 1.6
TFRC-202ENST00000392396 HRCP23327 699 aa25.01■■□□□ 1.59
TFRC-202ENST00000392396 MTUS2Q5JR59 1369 aa25■■□□□ 1.59
TFRC-202ENST00000392396 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.59
TFRC-202ENST00000392396 C14orf37Q86TY3 774 aa24.91■■□□□ 1.58
TFRC-202ENST00000392396 ANP32CO43423 234 aa24.91■■□□□ 1.58
TFRC-202ENST00000392396 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.58
TFRC-202ENST00000392396 CHIC2Q9UKJ5 165 aa24.85■■□□□ 1.57
TFRC-202ENST00000392396 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
TFRC-202ENST00000392396 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
TFRC-202ENST00000392396 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
TFRC-202ENST00000392396 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
TFRC-202ENST00000392396 TONSLQ96HA7 1378 aa24.76■■□□□ 1.55
TFRC-202ENST00000392396 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
TFRC-202ENST00000392396 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.558e-9■■■■□ 20.1
TFRC-202ENST00000392396 HAP1P54257 671 aaPredicted RBP24.71■■□□□ 1.55
TFRC-202ENST00000392396 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
TFRC-202ENST00000392396 EEA1Q15075 1411 aa24.69■■□□□ 1.54
TFRC-202ENST00000392396 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
TFRC-202ENST00000392396 A0A0G2JS52 829 aa24.67■■□□□ 1.54
TFRC-202ENST00000392396 CFDP1Q9UEE9 299 aaPredicted RBP24.66■■□□□ 1.54
TFRC-202ENST00000392396 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
TFRC-202ENST00000392396 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
TFRC-202ENST00000392396 CLIP1P30622 1438 aa24.6■■□□□ 1.53
TFRC-202ENST00000392396 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
TFRC-202ENST00000392396 KDM2AQ9Y2K7 1162 aa24.54■■□□□ 1.52
TFRC-202ENST00000392396 BCL11AQ9H165 835 aa24.53■■□□□ 1.52
TFRC-202ENST00000392396 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
TFRC-202ENST00000392396 ZBTB7CA1YPR0 619 aa24.51■■□□□ 1.51
TFRC-202ENST00000392396 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
TFRC-202ENST00000392396 HDGFP51858 240 aaKnown RBP24.49■■□□□ 1.51
TFRC-202ENST00000392396 GOLGA3Q08378 1498 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms