RNA–Protein interactions for RNA: ENST00000583074.5

ACADVL-232, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-232ENST00000583074 NISCHQ9Y2I1 1504 aa44.33■■■■■ 4.69
ACADVL-232ENST00000583074 CCDC180Q9P1Z9 1646 aa39.34■■■■□ 3.89
ACADVL-232ENST00000583074 ABCC9O60706 1549 aa38.43■■■■□ 3.74
ACADVL-232ENST00000583074 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
ACADVL-232ENST00000583074 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
ACADVL-232ENST00000583074 NACADO15069 1562 aa37■■■■□ 3.51
ACADVL-232ENST00000583074 ZCCHC6Q5VYS8 1495 aaKnown RBP36.93■■■■□ 3.5
ACADVL-232ENST00000583074 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
ACADVL-232ENST00000583074 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
ACADVL-232ENST00000583074 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
ACADVL-232ENST00000583074 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.351e-15■■■■■ 39.2
ACADVL-232ENST00000583074 SCRIBQ14160 1630 aa35.94■■■■□ 3.34
ACADVL-232ENST00000583074 BICRAQ9NZM4 1560 aa35.83■■■■□ 3.33
ACADVL-232ENST00000583074 SHROOM4Q9ULL8 1493 aa35.5■■■■□ 3.27
ACADVL-232ENST00000583074 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
ACADVL-232ENST00000583074 EIF4G1Q04637 1599 aaKnown RBP34.91■■■■□ 3.18
ACADVL-232ENST00000583074 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
ACADVL-232ENST00000583074 CECR2Q9BXF3 1484 aa34.52■■■■□ 3.12
ACADVL-232ENST00000583074 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
ACADVL-232ENST00000583074 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
ACADVL-232ENST00000583074 MROH2BQ7Z745 1585 aa34.16■■■■□ 3.06
ACADVL-232ENST00000583074 ATAD2BQ9ULI0 1458 aa34.16■■■■□ 3.06
ACADVL-232ENST00000583074 SMARCA2P51531 1590 aa34.15■■■■□ 3.06
ACADVL-232ENST00000583074 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
ACADVL-232ENST00000583074 PEG3Q9GZU2 1588 aa34■■■■□ 3.03
ACADVL-232ENST00000583074 HMGXB3Q12766 1538 aa33.95■■■■□ 3.03
ACADVL-232ENST00000583074 BAZ1BQ9UIG0 1483 aaKnown RBP33.91■■■■□ 3.02
ACADVL-232ENST00000583074 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
ACADVL-232ENST00000583074 WIZO95785 1651 aa33.8■■■■□ 3
ACADVL-232ENST00000583074 TOP2AP11388 1531 aaKnown RBP33.46■■■□□ 2.95
ACADVL-232ENST00000583074 NESP48681 1621 aa33.26■■■□□ 2.91
ACADVL-232ENST00000583074 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
ACADVL-232ENST00000583074 CADPSQ9ULU8 1353 aa33.16■■■□□ 2.9
ACADVL-232ENST00000583074 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
ACADVL-232ENST00000583074 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
ACADVL-232ENST00000583074 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
ACADVL-232ENST00000583074 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
ACADVL-232ENST00000583074 CFTRP13569 1480 aa32.96■■■□□ 2.87
ACADVL-232ENST00000583074 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
ACADVL-232ENST00000583074 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
ACADVL-232ENST00000583074 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
ACADVL-232ENST00000583074 CUX2O14529 1486 aa32.73■■■□□ 2.83
ACADVL-232ENST00000583074 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
ACADVL-232ENST00000583074 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.83
ACADVL-232ENST00000583074 MRC2Q9UBG0 1479 aa32.66■■■□□ 2.82
ACADVL-232ENST00000583074 WDR62O43379 1518 aa32.51■■■□□ 2.79
ACADVL-232ENST00000583074 URB2Q14146 1524 aaKnown RBP32.41■■■□□ 2.78
ACADVL-232ENST00000583074 ABCC8Q09428 1581 aa32.29■■■□□ 2.76
ACADVL-232ENST00000583074 TOPBP1Q92547 1522 aa32.26■■■□□ 2.75
ACADVL-232ENST00000583074 DNMBPQ6XZF7 1577 aa32.23■■■□□ 2.75
ACADVL-232ENST00000583074 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
ACADVL-232ENST00000583074 CUX1P39880 1505 aa32.04■■■□□ 2.72
ACADVL-232ENST00000583074 POLA1P09884 1462 aaPredicted RBP31.98■■■□□ 2.71
ACADVL-232ENST00000583074 FGD5Q6ZNL6 1462 aa31.93■■■□□ 2.7
ACADVL-232ENST00000583074 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
ACADVL-232ENST00000583074 SOGA1O94964 1423 aa31.9■■■□□ 2.7
ACADVL-232ENST00000583074 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
ACADVL-232ENST00000583074 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
ACADVL-232ENST00000583074 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
ACADVL-232ENST00000583074 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
ACADVL-232ENST00000583074 BIVM-ERCC5R4GMW8 1640 aa31.78■■■□□ 2.68
ACADVL-232ENST00000583074 SYNJ1O43426 1573 aa31.78■■■□□ 2.68
ACADVL-232ENST00000583074 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
ACADVL-232ENST00000583074 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.67
ACADVL-232ENST00000583074 TDRD9Q8NDG6 1382 aaKnown RBP31.69■■■□□ 2.66
ACADVL-232ENST00000583074 WDR97A6NE52 1622 aa31.64■■■□□ 2.66
ACADVL-232ENST00000583074 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
ACADVL-232ENST00000583074 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
ACADVL-232ENST00000583074 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
ACADVL-232ENST00000583074 GRIN2BQ13224 1484 aa31.5■■■□□ 2.63
ACADVL-232ENST00000583074 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
ACADVL-232ENST00000583074 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
ACADVL-232ENST00000583074 SNAPC4Q5SXM2 1469 aa31.43■■■□□ 2.62
ACADVL-232ENST00000583074 PBRM1Q86U86 1689 aa31.41■■■□□ 2.62
ACADVL-232ENST00000583074 FBLN2P98095 1184 aa31.4■■■□□ 2.62
ACADVL-232ENST00000583074 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
ACADVL-232ENST00000583074 CHMP7Q8WUX9 453 aaPredicted RBP31.32■■■□□ 2.6
ACADVL-232ENST00000583074 CHD1O14646 1710 aa31.32■■■□□ 2.6
ACADVL-232ENST00000583074 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
ACADVL-232ENST00000583074 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
ACADVL-232ENST00000583074 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
ACADVL-232ENST00000583074 ERICH3Q5RHP9 1530 aa31.25■■■□□ 2.59
ACADVL-232ENST00000583074 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
ACADVL-232ENST00000583074 FHAD1B1AJZ9 1412 aa31.16■■■□□ 2.58
ACADVL-232ENST00000583074 IGF1RP08069 1367 aa31.08■■■□□ 2.57
ACADVL-232ENST00000583074 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
ACADVL-232ENST00000583074 CUL7Q14999 1698 aa31■■■□□ 2.55
ACADVL-232ENST00000583074 CLASP1Q7Z460 1538 aa30.96■■■□□ 2.55
ACADVL-232ENST00000583074 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.55
ACADVL-232ENST00000583074 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
ACADVL-232ENST00000583074 CARMIL1Q5VZK9 1371 aa30.93■■■□□ 2.54
ACADVL-232ENST00000583074 NUP160Q12769 1436 aa30.91■■■□□ 2.54
ACADVL-232ENST00000583074 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
ACADVL-232ENST00000583074 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
ACADVL-232ENST00000583074 RIMBP3CA6NJZ7 1639 aa30.86■■■□□ 2.53
ACADVL-232ENST00000583074 RIMBP3BA6NNM3 1639 aa30.86■■■□□ 2.53
ACADVL-232ENST00000583074 RIMBP3Q9UFD9 1639 aa30.86■■■□□ 2.53
ACADVL-232ENST00000583074 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
ACADVL-232ENST00000583074 EEA1Q15075 1411 aa30.73■■■□□ 2.51
ACADVL-232ENST00000583074 CSRNP3Q8WYN3 585 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms