RNA–Protein interactions for RNA: ENST00000530329.1

TKFC-213, Transcript of triokinase and FMN cyclase, humanhuman

TSL 3

Gene TKFC, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-213ENST00000530329 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
TKFC-213ENST00000530329 ABCC9O60706 1549 aa27.29■■□□□ 1.96
TKFC-213ENST00000530329 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
TKFC-213ENST00000530329 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
TKFC-213ENST00000530329 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
TKFC-213ENST00000530329 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
TKFC-213ENST00000530329 NACADO15069 1562 aa25.62■■□□□ 1.69
TKFC-213ENST00000530329 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.674e-8■■■□□ 18
TKFC-213ENST00000530329 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
TKFC-213ENST00000530329 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
TKFC-213ENST00000530329 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
TKFC-213ENST00000530329 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
TKFC-213ENST00000530329 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
TKFC-213ENST00000530329 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
TKFC-213ENST00000530329 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
TKFC-213ENST00000530329 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
TKFC-213ENST00000530329 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
TKFC-213ENST00000530329 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
TKFC-213ENST00000530329 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
TKFC-213ENST00000530329 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
TKFC-213ENST00000530329 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
TKFC-213ENST00000530329 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
TKFC-213ENST00000530329 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
TKFC-213ENST00000530329 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
TKFC-213ENST00000530329 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
TKFC-213ENST00000530329 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
TKFC-213ENST00000530329 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
TKFC-213ENST00000530329 NESP48681 1621 aa23.41■■□□□ 1.34
TKFC-213ENST00000530329 CUX2O14529 1486 aa23.4■■□□□ 1.34
TKFC-213ENST00000530329 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
TKFC-213ENST00000530329 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
TKFC-213ENST00000530329 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
TKFC-213ENST00000530329 THOC2Q8NI27 1593 aaKnown RBP23.08■■□□□ 1.29
TKFC-213ENST00000530329 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
TKFC-213ENST00000530329 WIZO95785 1651 aa23.06■■□□□ 1.28
TKFC-213ENST00000530329 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
TKFC-213ENST00000530329 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
TKFC-213ENST00000530329 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
TKFC-213ENST00000530329 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
TKFC-213ENST00000530329 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
TKFC-213ENST00000530329 WDR62O43379 1518 aa22.75■■□□□ 1.23
TKFC-213ENST00000530329 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
TKFC-213ENST00000530329 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
TKFC-213ENST00000530329 CFTRP13569 1480 aa22.68■■□□□ 1.22
TKFC-213ENST00000530329 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
TKFC-213ENST00000530329 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
TKFC-213ENST00000530329 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
TKFC-213ENST00000530329 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
TKFC-213ENST00000530329 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
TKFC-213ENST00000530329 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
TKFC-213ENST00000530329 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
TKFC-213ENST00000530329 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
TKFC-213ENST00000530329 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
TKFC-213ENST00000530329 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
TKFC-213ENST00000530329 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.13
TKFC-213ENST00000530329 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.134e-8■■■■■ 34.1
TKFC-213ENST00000530329 FBLN2P98095 1184 aa22.13■■□□□ 1.13
TKFC-213ENST00000530329 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
TKFC-213ENST00000530329 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
TKFC-213ENST00000530329 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
TKFC-213ENST00000530329 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
TKFC-213ENST00000530329 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
TKFC-213ENST00000530329 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
TKFC-213ENST00000530329 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
TKFC-213ENST00000530329 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
TKFC-213ENST00000530329 CHD1O14646 1710 aa22.02■■□□□ 1.12
TKFC-213ENST00000530329 SOGA1O94964 1423 aa22.01■■□□□ 1.11
TKFC-213ENST00000530329 CYB5RLQ6IPT4 315 aa22.01■■□□□ 1.11
TKFC-213ENST00000530329 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
TKFC-213ENST00000530329 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
TKFC-213ENST00000530329 CUX1P39880 1505 aa21.9■■□□□ 1.1
TKFC-213ENST00000530329 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
TKFC-213ENST00000530329 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
TKFC-213ENST00000530329 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
TKFC-213ENST00000530329 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
TKFC-213ENST00000530329 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
TKFC-213ENST00000530329 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
TKFC-213ENST00000530329 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
TKFC-213ENST00000530329 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
TKFC-213ENST00000530329 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
TKFC-213ENST00000530329 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
TKFC-213ENST00000530329 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
TKFC-213ENST00000530329 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
TKFC-213ENST00000530329 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
TKFC-213ENST00000530329 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
TKFC-213ENST00000530329 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
TKFC-213ENST00000530329 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
TKFC-213ENST00000530329 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
TKFC-213ENST00000530329 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
TKFC-213ENST00000530329 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
TKFC-213ENST00000530329 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
TKFC-213ENST00000530329 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
TKFC-213ENST00000530329 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
TKFC-213ENST00000530329 NUP160Q12769 1436 aa21.38■■□□□ 1.01
TKFC-213ENST00000530329 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
TKFC-213ENST00000530329 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
TKFC-213ENST00000530329 JPH4Q96JJ6 628 aa21.28■■□□□ 1
TKFC-213ENST00000530329 SHROOM2Q13796 1616 aa21.28■■□□□ 1
TKFC-213ENST00000530329 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
TKFC-213ENST00000530329 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms