RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-222ENST00000630804 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
SPTAN1-222ENST00000630804 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-222ENST00000630804 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
SPTAN1-222ENST00000630804 NISCHQ9Y2I1 1504 aa12.99□□□□□ -0.33
SPTAN1-222ENST00000630804 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-222ENST00000630804 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
SPTAN1-222ENST00000630804 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
SPTAN1-222ENST00000630804 MYT1Q01538 1121 aa12.73□□□□□ -0.37
SPTAN1-222ENST00000630804 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
SPTAN1-222ENST00000630804 APLP2Q06481 763 aa12.69□□□□□ -0.38
SPTAN1-222ENST00000630804 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
SPTAN1-222ENST00000630804 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
SPTAN1-222ENST00000630804 NEFLP07196 543 aa12.5□□□□□ -0.41
SPTAN1-222ENST00000630804 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
SPTAN1-222ENST00000630804 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-222ENST00000630804 TTBK1Q5TCY1 1321 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-222ENST00000630804 PCGF6Q9BYE7 350 aa12.34□□□□□ -0.43
SPTAN1-222ENST00000630804 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-222ENST00000630804 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
SPTAN1-222ENST00000630804 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
SPTAN1-222ENST00000630804 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-222ENST00000630804 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-222ENST00000630804 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-222ENST00000630804 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-222ENST00000630804 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
SPTAN1-222ENST00000630804 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
SPTAN1-222ENST00000630804 POLR3GLQ9BT43 218 aa11.92□□□□□ -0.5
SPTAN1-222ENST00000630804 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-222ENST00000630804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-222ENST00000630804 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-222ENST00000630804 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-222ENST00000630804 HRCP23327 699 aa11.72□□□□□ -0.53
SPTAN1-222ENST00000630804 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
SPTAN1-222ENST00000630804 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-222ENST00000630804 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-222ENST00000630804 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
SPTAN1-222ENST00000630804 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
SPTAN1-222ENST00000630804 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-222ENST00000630804 ITGAEP38570 1179 aa11.6□□□□□ -0.55
SPTAN1-222ENST00000630804 ANP32BQ92688 251 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-222ENST00000630804 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
SPTAN1-222ENST00000630804 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
SPTAN1-222ENST00000630804 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-222ENST00000630804 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-222ENST00000630804 BCANQ96GW7 911 aa11.44□□□□□ -0.58
SPTAN1-222ENST00000630804 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-222ENST00000630804 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-222ENST00000630804 ABCC9O60706 1549 aa11.39□□□□□ -0.59
SPTAN1-222ENST00000630804 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-222ENST00000630804 GTF3C3Q9Y5Q9 886 aa11.38□□□□□ -0.59
SPTAN1-222ENST00000630804 CDK11BP21127 795 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-222ENST00000630804 NEFMP07197 916 aa11.36□□□□□ -0.59
SPTAN1-222ENST00000630804 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-222ENST00000630804 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTAN1-222ENST00000630804 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
SPTAN1-222ENST00000630804 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-222ENST00000630804 FBLN2P98095 1184 aa11.31□□□□□ -0.6
SPTAN1-222ENST00000630804 ANP32CO43423 234 aa11.28□□□□□ -0.6
SPTAN1-222ENST00000630804 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-222ENST00000630804 LOC105371045A0A1W2PR82 267 aa11.25□□□□□ -0.61
SPTAN1-222ENST00000630804 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
SPTAN1-222ENST00000630804 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.62
SPTAN1-222ENST00000630804 ARXQ96QS3 562 aa11.2□□□□□ -0.62
SPTAN1-222ENST00000630804 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-222ENST00000630804 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
SPTAN1-222ENST00000630804 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
SPTAN1-222ENST00000630804 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTAN1-222ENST00000630804 NBR1Q14596 966 aa11.12□□□□□ -0.63
SPTAN1-222ENST00000630804 TRIM44Q96DX7 344 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-222ENST00000630804 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
SPTAN1-222ENST00000630804 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
SPTAN1-222ENST00000630804 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.64
SPTAN1-222ENST00000630804 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
SPTAN1-222ENST00000630804 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
SPTAN1-222ENST00000630804 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
SPTAN1-222ENST00000630804 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
SPTAN1-222ENST00000630804 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-222ENST00000630804 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-222ENST00000630804 ZRSR1Q15695 479 aaKnown RBP10.99□□□□□ -0.65
SPTAN1-222ENST00000630804 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
SPTAN1-222ENST00000630804 FKBP8Q14318 412 aa10.97□□□□□ -0.65
SPTAN1-222ENST00000630804 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
SPTAN1-222ENST00000630804 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-222ENST00000630804 ANP32EQ9BTT0 268 aa10.95□□□□□ -0.66
SPTAN1-222ENST00000630804 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
SPTAN1-222ENST00000630804 A0A0G2JS52 829 aa10.94□□□□□ -0.66
SPTAN1-222ENST00000630804 GOLGA6L22H0YM25 854 aa10.93□□□□□ -0.66
SPTAN1-222ENST00000630804 CCDC136Q96JN2 1154 aa10.92□□□□□ -0.66
SPTAN1-222ENST00000630804 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
SPTAN1-222ENST00000630804 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
SPTAN1-222ENST00000630804 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
SPTAN1-222ENST00000630804 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
SPTAN1-222ENST00000630804 BECN1Q14457 450 aa10.9□□□□□ -0.67
SPTAN1-222ENST00000630804 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-222ENST00000630804 NAP1L5Q96NT1 182 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-222ENST00000630804 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
SPTAN1-222ENST00000630804 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
SPTAN1-222ENST00000630804 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
SPTAN1-222ENST00000630804 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
SPTAN1-222ENST00000630804 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms