RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-222	ENST00000630804	DCAF8L2	P0C7V8	631 aa		13.9	□□□□□ -0.18
SPTAN1-222	ENST00000630804	PELP1	Q8IZL8	1130 aa	Known RBP	13.61	□□□□□ -0.23
SPTAN1-222	ENST00000630804	ERICH6	Q7L0X2	663 aa		13.11	□□□□□ -0.31
SPTAN1-222	ENST00000630804	NISCH	Q9Y2I1	1504 aa		12.99	□□□□□ -0.33
SPTAN1-222	ENST00000630804	CCER1	Q8TC90	406 aa	Predicted RBP	12.98	□□□□□ -0.33
SPTAN1-222	ENST00000630804	SUPT5H	O00267	1087 aa	Known RBP	12.94	□□□□□ -0.34
SPTAN1-222	ENST00000630804	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.79	□□□□□ -0.36
SPTAN1-222	ENST00000630804	MYT1	Q01538	1121 aa		12.73	□□□□□ -0.37
SPTAN1-222	ENST00000630804	EHMT2	Q96KQ7	1210 aa		12.72	□□□□□ -0.37
SPTAN1-222	ENST00000630804	APLP2	Q06481	763 aa		12.69	□□□□□ -0.38
SPTAN1-222	ENST00000630804	SHROOM4	Q9ULL8	1493 aa		12.65	□□□□□ -0.38
SPTAN1-222	ENST00000630804	CENPB	P07199	599 aa	Predicted RBP	12.62	□□□□□ -0.39
SPTAN1-222	ENST00000630804	NEFL	P07196	543 aa		12.5	□□□□□ -0.41
SPTAN1-222	ENST00000630804	YTHDC1	Q96MU7	727 aa	Known RBP	12.48	□□□□□ -0.41
SPTAN1-222	ENST00000630804	DAXX	Q9UER7	740 aa	Predicted RBP	12.44	□□□□□ -0.42
SPTAN1-222	ENST00000630804	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.35	□□□□□ -0.43
SPTAN1-222	ENST00000630804	PCGF6	Q9BYE7	350 aa		12.34	□□□□□ -0.43
SPTAN1-222	ENST00000630804	ZEB1	P37275	1124 aa	Predicted RBP	12.21	□□□□□ -0.45
SPTAN1-222	ENST00000630804	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.17	□□□□□ -0.46
SPTAN1-222	ENST00000630804	TRIM41	Q8WV44	630 aa		12.09	□□□□□ -0.47
SPTAN1-222	ENST00000630804	RANGAP1	P46060	587 aa	Predicted RBP	12.09	□□□□□ -0.47
SPTAN1-222	ENST00000630804	RTL5	Q5HYW3	569 aa	Predicted RBP	12.07	□□□□□ -0.48
SPTAN1-222	ENST00000630804	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.07	□□□□□ -0.48
SPTAN1-222	ENST00000630804	UBTF	P17480	764 aa	Known RBP	12.04	□□□□□ -0.48
SPTAN1-222	ENST00000630804	CLSPN	Q9HAW4	1339 aa		11.96	□□□□□ -0.49
SPTAN1-222	ENST00000630804	MYT1L	Q9UL68	1186 aa		11.93	□□□□□ -0.5
SPTAN1-222	ENST00000630804	POLR3GL	Q9BT43	218 aa		11.92	□□□□□ -0.5
SPTAN1-222	ENST00000630804	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.81	□□□□□ -0.52
SPTAN1-222	ENST00000630804	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.8	□□□□□ -0.52
SPTAN1-222	ENST00000630804	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.8	□□□□□ -0.52
SPTAN1-222	ENST00000630804	CNGB1	Q14028	1251 aa	Predicted RBP	11.8	□□□□□ -0.52
SPTAN1-222	ENST00000630804	HRC	P23327	699 aa		11.72	□□□□□ -0.53
SPTAN1-222	ENST00000630804	CHIC1	Q5VXU3	224 aa		11.7	□□□□□ -0.54
SPTAN1-222	ENST00000630804	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.7	□□□□□ -0.54
SPTAN1-222	ENST00000630804	EIF5B	O60841	1220 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-222	ENST00000630804	GLIPR1L2	Q4G1C9	344 aa		11.62	□□□□□ -0.55
SPTAN1-222	ENST00000630804	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.6	□□□□□ -0.55
SPTAN1-222	ENST00000630804	TRIM26	Q12899	539 aa	Predicted RBP	11.6	□□□□□ -0.55
SPTAN1-222	ENST00000630804	ITGAE	P38570	1179 aa		11.6	□□□□□ -0.55
SPTAN1-222	ENST00000630804	ANP32B	Q92688	251 aa	Known RBP	11.56	□□□□□ -0.56
SPTAN1-222	ENST00000630804	BCL11A	Q9H165	835 aa		11.55	□□□□□ -0.56
SPTAN1-222	ENST00000630804	SLC24A1	O60721	1099 aa		11.53	□□□□□ -0.56
SPTAN1-222	ENST00000630804	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.53	□□□□□ -0.56
SPTAN1-222	ENST00000630804	CANX	P27824	592 aa	Known RBP	11.45	□□□□□ -0.58
SPTAN1-222	ENST00000630804	BCAN	Q96GW7	911 aa		11.44	□□□□□ -0.58
SPTAN1-222	ENST00000630804	ANP32A	P39687	249 aa	Known RBP	11.42	□□□□□ -0.58
SPTAN1-222	ENST00000630804	HSP90AA1	P07900	732 aa	Known RBP	11.39	□□□□□ -0.59
SPTAN1-222	ENST00000630804	ABCC9	O60706	1549 aa		11.39	□□□□□ -0.59
SPTAN1-222	ENST00000630804	DIEXF	Q68CQ4	756 aa	Known RBP	11.39	□□□□□ -0.59
SPTAN1-222	ENST00000630804	GTF3C3	Q9Y5Q9	886 aa		11.38	□□□□□ -0.59
SPTAN1-222	ENST00000630804	CDK11B	P21127	795 aa	Known RBP	11.37	□□□□□ -0.59
SPTAN1-222	ENST00000630804	NEFM	P07197	916 aa		11.36	□□□□□ -0.59
SPTAN1-222	ENST00000630804	FAM50A	Q14320	339 aa	Known RBP	11.35	□□□□□ -0.59
SPTAN1-222	ENST00000630804	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
SPTAN1-222	ENST00000630804	TRIM52	Q96A61	297 aa		11.32	□□□□□ -0.6
SPTAN1-222	ENST00000630804	NPM2	Q86SE8	214 aa	Known RBP	11.32	□□□□□ -0.6
SPTAN1-222	ENST00000630804	FBLN2	P98095	1184 aa		11.31	□□□□□ -0.6
SPTAN1-222	ENST00000630804	ANP32C	O43423	234 aa		11.28	□□□□□ -0.6
SPTAN1-222	ENST00000630804	UPF2	Q9HAU5	1272 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-222	ENST00000630804	LOC105371045	A0A1W2PR82	267 aa		11.25	□□□□□ -0.61
SPTAN1-222	ENST00000630804	TNNT2	P45379	298 aa	Predicted RBP	11.23	□□□□□ -0.61
SPTAN1-222	ENST00000630804	ESF1	Q9H501	851 aa	Known RBP	11.21	□□□□□ -0.62
SPTAN1-222	ENST00000630804	ARX	Q96QS3	562 aa		11.2	□□□□□ -0.62
SPTAN1-222	ENST00000630804	ZNF326	Q5BKZ1	582 aa	Known RBP	11.19	□□□□□ -0.62
SPTAN1-222	ENST00000630804	NEUROD1	Q13562	356 aa		11.19	□□□□□ -0.62
SPTAN1-222	ENST00000630804	ACIN1	Q9UKV3	1341 aa	Known RBP	11.15	□□□□□ -0.62
SPTAN1-222	ENST00000630804	NPM1	P06748	294 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
SPTAN1-222	ENST00000630804	NBR1	Q14596	966 aa		11.12	□□□□□ -0.63
SPTAN1-222	ENST00000630804	TRIM44	Q96DX7	344 aa	Predicted RBP	11.08	□□□□□ -0.64
SPTAN1-222	ENST00000630804	STAG3	Q9UJ98	1225 aa		11.06	□□□□□ -0.64
SPTAN1-222	ENST00000630804	SCAF1	Q9H7N4	1312 aa	Known RBP	11.03	□□□□□ -0.64
SPTAN1-222	ENST00000630804	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.02	□□□□□ -0.64
SPTAN1-222	ENST00000630804	NCL	P19338	710 aa	Known RBP	11.01	□□□□□ -0.65
SPTAN1-222	ENST00000630804	DNTTIP2	Q5QJE6	756 aa	Known RBP	11	□□□□□ -0.65
SPTAN1-222	ENST00000630804	PLPPR3	Q6T4P5	718 aa		11	□□□□□ -0.65
SPTAN1-222	ENST00000630804	P3H3	Q8IVL6	736 aa		10.99	□□□□□ -0.65
SPTAN1-222	ENST00000630804	TULP1	O00294	542 aa	Predicted RBP	10.99	□□□□□ -0.65
SPTAN1-222	ENST00000630804	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.99	□□□□□ -0.65
SPTAN1-222	ENST00000630804	ZRSR1	Q15695	479 aa	Known RBP	10.99	□□□□□ -0.65
SPTAN1-222	ENST00000630804	ARID3C	A6NKF2	412 aa		10.97	□□□□□ -0.65
SPTAN1-222	ENST00000630804	FKBP8	Q14318	412 aa		10.97	□□□□□ -0.65
SPTAN1-222	ENST00000630804	CSRNP3	Q8WYN3	585 aa		10.97	□□□□□ -0.65
SPTAN1-222	ENST00000630804	PTMA	P06454	111 aa	Known RBP	10.96	□□□□□ -0.65
SPTAN1-222	ENST00000630804	ANP32E	Q9BTT0	268 aa		10.95	□□□□□ -0.66
SPTAN1-222	ENST00000630804	CHGA	P10645	457 aa	Known RBP	10.94	□□□□□ -0.66
SPTAN1-222	ENST00000630804		A0A0G2JS52	829 aa		10.94	□□□□□ -0.66
SPTAN1-222	ENST00000630804	GOLGA6L22	H0YM25	854 aa		10.93	□□□□□ -0.66
SPTAN1-222	ENST00000630804	CCDC136	Q96JN2	1154 aa		10.92	□□□□□ -0.66
SPTAN1-222	ENST00000630804	MYH16	Q9H6N6	1097 aa		10.92	□□□□□ -0.66
SPTAN1-222	ENST00000630804	SCRIB	Q14160	1630 aa		10.92	□□□□□ -0.66
SPTAN1-222	ENST00000630804	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.92	□□□□□ -0.66
SPTAN1-222	ENST00000630804	NCBP3	Q53F19	620 aa	Known RBP	10.91	□□□□□ -0.66
SPTAN1-222	ENST00000630804	BECN1	Q14457	450 aa		10.9	□□□□□ -0.67
SPTAN1-222	ENST00000630804	SALL2	Q9Y467	1007 aa	Predicted RBP	10.88	□□□□□ -0.67
SPTAN1-222	ENST00000630804	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.88	□□□□□ -0.67
SPTAN1-222	ENST00000630804	TONSL	Q96HA7	1378 aa		10.86	□□□□□ -0.67
SPTAN1-222	ENST00000630804	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
SPTAN1-222	ENST00000630804	TSPY4	P0CV99	314 aa		10.85	□□□□□ -0.67
SPTAN1-222	ENST00000630804	TSPY10	P0CW01	314 aa		10.85	□□□□□ -0.67
SPTAN1-222	ENST00000630804	ERICH6B	Q5W0A0	696 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms