RNA–Protein interactions for RNA: ENST00000474712.1

P4HB-209, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-209ENST00000474712 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
P4HB-209ENST00000474712 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
P4HB-209ENST00000474712 ABCC9O60706 1549 aa27.77■■■□□ 2.04
P4HB-209ENST00000474712 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
P4HB-209ENST00000474712 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
P4HB-209ENST00000474712 NACADO15069 1562 aa26.52■■□□□ 1.84
P4HB-209ENST00000474712 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
P4HB-209ENST00000474712 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
P4HB-209ENST00000474712 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.77
P4HB-209ENST00000474712 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
P4HB-209ENST00000474712 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
P4HB-209ENST00000474712 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
P4HB-209ENST00000474712 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
P4HB-209ENST00000474712 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
P4HB-209ENST00000474712 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
P4HB-209ENST00000474712 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
P4HB-209ENST00000474712 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
P4HB-209ENST00000474712 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
P4HB-209ENST00000474712 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
P4HB-209ENST00000474712 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
P4HB-209ENST00000474712 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
P4HB-209ENST00000474712 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
P4HB-209ENST00000474712 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
P4HB-209ENST00000474712 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
P4HB-209ENST00000474712 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
P4HB-209ENST00000474712 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
P4HB-209ENST00000474712 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
P4HB-209ENST00000474712 WIZO95785 1651 aa24.13■■□□□ 1.45
P4HB-209ENST00000474712 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
P4HB-209ENST00000474712 NESP48681 1621 aa24.02■■□□□ 1.44
P4HB-209ENST00000474712 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
P4HB-209ENST00000474712 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
P4HB-209ENST00000474712 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
P4HB-209ENST00000474712 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
P4HB-209ENST00000474712 CUX2O14529 1486 aa23.7■■□□□ 1.38
P4HB-209ENST00000474712 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
P4HB-209ENST00000474712 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
P4HB-209ENST00000474712 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
P4HB-209ENST00000474712 CFTRP13569 1480 aa23.61■■□□□ 1.37
P4HB-209ENST00000474712 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
P4HB-209ENST00000474712 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
P4HB-209ENST00000474712 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
P4HB-209ENST00000474712 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
P4HB-209ENST00000474712 WDR62O43379 1518 aa23.4■■□□□ 1.34
P4HB-209ENST00000474712 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
P4HB-209ENST00000474712 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
P4HB-209ENST00000474712 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
P4HB-209ENST00000474712 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
P4HB-209ENST00000474712 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
P4HB-209ENST00000474712 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
P4HB-209ENST00000474712 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
P4HB-209ENST00000474712 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
P4HB-209ENST00000474712 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
P4HB-209ENST00000474712 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
P4HB-209ENST00000474712 CUX1P39880 1505 aa22.89■■□□□ 1.26
P4HB-209ENST00000474712 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
P4HB-209ENST00000474712 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
P4HB-209ENST00000474712 SOGA1O94964 1423 aa22.82■■□□□ 1.24
P4HB-209ENST00000474712 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
P4HB-209ENST00000474712 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
P4HB-209ENST00000474712 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
P4HB-209ENST00000474712 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
P4HB-209ENST00000474712 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
P4HB-209ENST00000474712 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
P4HB-209ENST00000474712 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
P4HB-209ENST00000474712 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
P4HB-209ENST00000474712 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
P4HB-209ENST00000474712 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
P4HB-209ENST00000474712 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
P4HB-209ENST00000474712 CHD1O14646 1710 aa22.57■■□□□ 1.2
P4HB-209ENST00000474712 FBLN2P98095 1184 aa22.56■■□□□ 1.2
P4HB-209ENST00000474712 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
P4HB-209ENST00000474712 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
P4HB-209ENST00000474712 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
P4HB-209ENST00000474712 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
P4HB-209ENST00000474712 MAGI1Q96QZ7 1491 aaPredicted RBP22.49■■□□□ 1.19
P4HB-209ENST00000474712 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
P4HB-209ENST00000474712 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
P4HB-209ENST00000474712 SYNJ2O15056 1496 aa22.42■■□□□ 1.18
P4HB-209ENST00000474712 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
P4HB-209ENST00000474712 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.18
P4HB-209ENST00000474712 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.18
P4HB-209ENST00000474712 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.18
P4HB-209ENST00000474712 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
P4HB-209ENST00000474712 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
P4HB-209ENST00000474712 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
P4HB-209ENST00000474712 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
P4HB-209ENST00000474712 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
P4HB-209ENST00000474712 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
P4HB-209ENST00000474712 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
P4HB-209ENST00000474712 IGF1RP08069 1367 aa22.19■■□□□ 1.14
P4HB-209ENST00000474712 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
P4HB-209ENST00000474712 NUP160Q12769 1436 aa22.18■■□□□ 1.14
P4HB-209ENST00000474712 KIF27Q86VH2 1401 aa22.18■■□□□ 1.14
P4HB-209ENST00000474712 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
P4HB-209ENST00000474712 ERCC6L2Q5T890 1561 aa22.05■■□□□ 1.12
P4HB-209ENST00000474712 CUL7Q14999 1698 aa22.04■■□□□ 1.12
P4HB-209ENST00000474712 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
P4HB-209ENST00000474712 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
P4HB-209ENST00000474712 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms