RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
SNU13-203ENST00000401959 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
SNU13-203ENST00000401959 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
SNU13-203ENST00000401959 ABCC9O60706 1549 aa24.37■■□□□ 1.49
SNU13-203ENST00000401959 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
SNU13-203ENST00000401959 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
SNU13-203ENST00000401959 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
SNU13-203ENST00000401959 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
SNU13-203ENST00000401959 NACADO15069 1562 aa23.59■■□□□ 1.37
SNU13-203ENST00000401959 RB1CC1Q8TDY2 1594 aa23.53■■□□□ 1.36
SNU13-203ENST00000401959 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
SNU13-203ENST00000401959 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
SNU13-203ENST00000401959 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
SNU13-203ENST00000401959 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNU13-203ENST00000401959 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
SNU13-203ENST00000401959 RSF1Q96T23 1441 aaPredicted RBP22.68■■□□□ 1.22
SNU13-203ENST00000401959 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
SNU13-203ENST00000401959 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
SNU13-203ENST00000401959 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
SNU13-203ENST00000401959 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
SNU13-203ENST00000401959 WIZO95785 1651 aa22.38■■□□□ 1.17
SNU13-203ENST00000401959 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
SNU13-203ENST00000401959 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.15
SNU13-203ENST00000401959 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
SNU13-203ENST00000401959 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
SNU13-203ENST00000401959 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
SNU13-203ENST00000401959 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
SNU13-203ENST00000401959 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
SNU13-203ENST00000401959 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
SNU13-203ENST00000401959 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
SNU13-203ENST00000401959 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
SNU13-203ENST00000401959 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
SNU13-203ENST00000401959 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
SNU13-203ENST00000401959 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
SNU13-203ENST00000401959 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
SNU13-203ENST00000401959 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
SNU13-203ENST00000401959 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1
SNU13-203ENST00000401959 PRDM2Q13029 1718 aa21.32■■□□□ 1
SNU13-203ENST00000401959 CFTRP13569 1480 aa21.31■■□□□ 1
SNU13-203ENST00000401959 FAM9AQ8IZU1 332 aaPredicted RBP21.28■■□□□ 1
SNU13-203ENST00000401959 SYNJ1O43426 1573 aa21.27■■□□□ 1
SNU13-203ENST00000401959 NESP48681 1621 aa21.22■□□□□ 0.99
SNU13-203ENST00000401959 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
SNU13-203ENST00000401959 EEA1Q15075 1411 aa21.19■□□□□ 0.98
SNU13-203ENST00000401959 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
SNU13-203ENST00000401959 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
SNU13-203ENST00000401959 LAMC3Q9Y6N6 1575 aa21.14■□□□□ 0.97
SNU13-203ENST00000401959 SOGA1O94964 1423 aa21.13■□□□□ 0.97
SNU13-203ENST00000401959 CUX1P39880 1505 aa21.07■□□□□ 0.96
SNU13-203ENST00000401959 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
SNU13-203ENST00000401959 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
SNU13-203ENST00000401959 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
SNU13-203ENST00000401959 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
SNU13-203ENST00000401959 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
SNU13-203ENST00000401959 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
SNU13-203ENST00000401959 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
SNU13-203ENST00000401959 KIF21BO75037 1637 aa20.92■□□□□ 0.94
SNU13-203ENST00000401959 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
SNU13-203ENST00000401959 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
SNU13-203ENST00000401959 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
SNU13-203ENST00000401959 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
SNU13-203ENST00000401959 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
SNU13-203ENST00000401959 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SNU13-203ENST00000401959 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
SNU13-203ENST00000401959 TOPBP1Q92547 1522 aa20.77■□□□□ 0.91
SNU13-203ENST00000401959 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
SNU13-203ENST00000401959 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
SNU13-203ENST00000401959 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
SNU13-203ENST00000401959 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
SNU13-203ENST00000401959 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
SNU13-203ENST00000401959 CUX2O14529 1486 aa20.71■□□□□ 0.91
SNU13-203ENST00000401959 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
SNU13-203ENST00000401959 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
SNU13-203ENST00000401959 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
SNU13-203ENST00000401959 WDR62O43379 1518 aa20.66■□□□□ 0.9
SNU13-203ENST00000401959 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.89
SNU13-203ENST00000401959 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
SNU13-203ENST00000401959 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
SNU13-203ENST00000401959 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.88
SNU13-203ENST00000401959 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.88
SNU13-203ENST00000401959 IGF1RP08069 1367 aa20.57■□□□□ 0.88
SNU13-203ENST00000401959 CLIP1P30622 1438 aa20.55■□□□□ 0.88
SNU13-203ENST00000401959 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
SNU13-203ENST00000401959 CUL7Q14999 1698 aa20.49■□□□□ 0.87
SNU13-203ENST00000401959 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
SNU13-203ENST00000401959 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
SNU13-203ENST00000401959 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
SNU13-203ENST00000401959 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
SNU13-203ENST00000401959 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
SNU13-203ENST00000401959 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
SNU13-203ENST00000401959 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
SNU13-203ENST00000401959 PBRM1Q86U86 1689 aa20.33■□□□□ 0.84
SNU13-203ENST00000401959 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
SNU13-203ENST00000401959 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
SNU13-203ENST00000401959 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
SNU13-203ENST00000401959 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
SNU13-203ENST00000401959 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.841e-20■■■■■ 27.6
SNU13-203ENST00000401959 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
SNU13-203ENST00000401959 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
SNU13-203ENST00000401959 APLP2Q06481 763 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms