RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-223ENST00000494727 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
ACSS2-223ENST00000494727 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
ACSS2-223ENST00000494727 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
ACSS2-223ENST00000494727 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
ACSS2-223ENST00000494727 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
ACSS2-223ENST00000494727 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
ACSS2-223ENST00000494727 FOXD1Q16676 465 aa22.16■■□□□ 1.14
ACSS2-223ENST00000494727 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
ACSS2-223ENST00000494727 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
ACSS2-223ENST00000494727 ADRA2BP18089 450 aa21.27■■□□□ 1
ACSS2-223ENST00000494727 ABCC9O60706 1549 aa21.27■■□□□ 1
ACSS2-223ENST00000494727 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
ACSS2-223ENST00000494727 MSH5O43196 834 aa20.44■□□□□ 0.86
ACSS2-223ENST00000494727 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
ACSS2-223ENST00000494727 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
ACSS2-223ENST00000494727 NACADO15069 1562 aa20.21■□□□□ 0.83
ACSS2-223ENST00000494727 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
ACSS2-223ENST00000494727 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
ACSS2-223ENST00000494727 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
ACSS2-223ENST00000494727 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.771e-7■□□□□ 11.1
ACSS2-223ENST00000494727 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
ACSS2-223ENST00000494727 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
ACSS2-223ENST00000494727 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
ACSS2-223ENST00000494727 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
ACSS2-223ENST00000494727 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
ACSS2-223ENST00000494727 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
ACSS2-223ENST00000494727 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
ACSS2-223ENST00000494727 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
ACSS2-223ENST00000494727 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
ACSS2-223ENST00000494727 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
ACSS2-223ENST00000494727 KCNA4P22459 653 aa19.11■□□□□ 0.65
ACSS2-223ENST00000494727 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
ACSS2-223ENST00000494727 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
ACSS2-223ENST00000494727 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
ACSS2-223ENST00000494727 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
ACSS2-223ENST00000494727 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
ACSS2-223ENST00000494727 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
ACSS2-223ENST00000494727 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
ACSS2-223ENST00000494727 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
ACSS2-223ENST00000494727 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
ACSS2-223ENST00000494727 POTEDQ86YR6 584 aa18.69■□□□□ 0.58
ACSS2-223ENST00000494727 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
ACSS2-223ENST00000494727 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
ACSS2-223ENST00000494727 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
ACSS2-223ENST00000494727 SMARCA2P51531 1590 aa18.64■□□□□ 0.58
ACSS2-223ENST00000494727 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
ACSS2-223ENST00000494727 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
ACSS2-223ENST00000494727 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
ACSS2-223ENST00000494727 WIZO95785 1651 aa18.46■□□□□ 0.55
ACSS2-223ENST00000494727 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
ACSS2-223ENST00000494727 NESP48681 1621 aa18.36■□□□□ 0.53
ACSS2-223ENST00000494727 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
ACSS2-223ENST00000494727 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
ACSS2-223ENST00000494727 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
ACSS2-223ENST00000494727 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
ACSS2-223ENST00000494727 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
ACSS2-223ENST00000494727 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
ACSS2-223ENST00000494727 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
ACSS2-223ENST00000494727 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
ACSS2-223ENST00000494727 CUX2O14529 1486 aa18.08■□□□□ 0.49
ACSS2-223ENST00000494727 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
ACSS2-223ENST00000494727 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
ACSS2-223ENST00000494727 CFTRP13569 1480 aa18■□□□□ 0.47
ACSS2-223ENST00000494727 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
ACSS2-223ENST00000494727 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
ACSS2-223ENST00000494727 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
ACSS2-223ENST00000494727 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
ACSS2-223ENST00000494727 WDR62O43379 1518 aa17.88■□□□□ 0.45
ACSS2-223ENST00000494727 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
ACSS2-223ENST00000494727 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
ACSS2-223ENST00000494727 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
ACSS2-223ENST00000494727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.432e-9■□□□□ 9.9
ACSS2-223ENST00000494727 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
ACSS2-223ENST00000494727 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
ACSS2-223ENST00000494727 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
ACSS2-223ENST00000494727 ZBTB22O15209 634 aa17.6■□□□□ 0.41
ACSS2-223ENST00000494727 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
ACSS2-223ENST00000494727 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
ACSS2-223ENST00000494727 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
ACSS2-223ENST00000494727 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
ACSS2-223ENST00000494727 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
ACSS2-223ENST00000494727 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
ACSS2-223ENST00000494727 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
ACSS2-223ENST00000494727 CUX1P39880 1505 aa17.51■□□□□ 0.39
ACSS2-223ENST00000494727 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
ACSS2-223ENST00000494727 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
ACSS2-223ENST00000494727 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
ACSS2-223ENST00000494727 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
ACSS2-223ENST00000494727 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
ACSS2-223ENST00000494727 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
ACSS2-223ENST00000494727 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.386e-9■■■■■ 39.2
ACSS2-223ENST00000494727 SOGA1O94964 1423 aa17.43■□□□□ 0.38
ACSS2-223ENST00000494727 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
ACSS2-223ENST00000494727 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
ACSS2-223ENST00000494727 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
ACSS2-223ENST00000494727 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
ACSS2-223ENST00000494727 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
ACSS2-223ENST00000494727 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
ACSS2-223ENST00000494727 FBLN2P98095 1184 aa17.3■□□□□ 0.36
ACSS2-223ENST00000494727 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms