RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
TSPAN9-203ENST00000431374 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
TSPAN9-203ENST00000431374 ABCC9O60706 1549 aa32.85■■■□□ 2.85
TSPAN9-203ENST00000431374 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
TSPAN9-203ENST00000431374 NACADO15069 1562 aa31.43■■■□□ 2.62
TSPAN9-203ENST00000431374 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
TSPAN9-203ENST00000431374 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
TSPAN9-203ENST00000431374 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
TSPAN9-203ENST00000431374 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
TSPAN9-203ENST00000431374 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
TSPAN9-203ENST00000431374 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
TSPAN9-203ENST00000431374 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
TSPAN9-203ENST00000431374 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
TSPAN9-203ENST00000431374 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
TSPAN9-203ENST00000431374 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
TSPAN9-203ENST00000431374 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
TSPAN9-203ENST00000431374 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
TSPAN9-203ENST00000431374 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
TSPAN9-203ENST00000431374 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
TSPAN9-203ENST00000431374 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
TSPAN9-203ENST00000431374 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
TSPAN9-203ENST00000431374 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
TSPAN9-203ENST00000431374 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
TSPAN9-203ENST00000431374 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
TSPAN9-203ENST00000431374 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
TSPAN9-203ENST00000431374 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
TSPAN9-203ENST00000431374 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.19
TSPAN9-203ENST00000431374 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
TSPAN9-203ENST00000431374 WIZO95785 1651 aa28.51■■■□□ 2.15
TSPAN9-203ENST00000431374 NESP48681 1621 aa28.37■■■□□ 2.13
TSPAN9-203ENST00000431374 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
TSPAN9-203ENST00000431374 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
TSPAN9-203ENST00000431374 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
TSPAN9-203ENST00000431374 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.1
TSPAN9-203ENST00000431374 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
TSPAN9-203ENST00000431374 CUX2O14529 1486 aa28.08■■■□□ 2.09
TSPAN9-203ENST00000431374 CFTRP13569 1480 aa27.99■■■□□ 2.07
TSPAN9-203ENST00000431374 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
TSPAN9-203ENST00000431374 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
TSPAN9-203ENST00000431374 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
TSPAN9-203ENST00000431374 FANCD2Q9BXW9 1451 aa27.85■■■□□ 2.05
TSPAN9-203ENST00000431374 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
TSPAN9-203ENST00000431374 CEP164Q9UPV0 1460 aa27.82■■■□□ 2.04
TSPAN9-203ENST00000431374 WDR62O43379 1518 aa27.73■■■□□ 2.03
TSPAN9-203ENST00000431374 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
TSPAN9-203ENST00000431374 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
TSPAN9-203ENST00000431374 PRDM2Q13029 1718 aa27.56■■■□□ 2
TSPAN9-203ENST00000431374 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
TSPAN9-203ENST00000431374 TOPBP1Q92547 1522 aa27.37■■□□□ 1.97
TSPAN9-203ENST00000431374 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
TSPAN9-203ENST00000431374 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
TSPAN9-203ENST00000431374 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
TSPAN9-203ENST00000431374 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
TSPAN9-203ENST00000431374 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
TSPAN9-203ENST00000431374 CUX1P39880 1505 aa27.12■■□□□ 1.93
TSPAN9-203ENST00000431374 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
TSPAN9-203ENST00000431374 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
TSPAN9-203ENST00000431374 SOGA1O94964 1423 aa27.03■■□□□ 1.92
TSPAN9-203ENST00000431374 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
TSPAN9-203ENST00000431374 EIF4G3O43432 1585 aaKnown RBP26.98■■□□□ 1.91
TSPAN9-203ENST00000431374 AQRO60306 1485 aaKnown RBP eCLIP26.98■■□□□ 1.918e-8■■■■■ 32.4
TSPAN9-203ENST00000431374 TDRD9Q8NDG6 1382 aaKnown RBP26.91■■□□□ 1.9
TSPAN9-203ENST00000431374 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
TSPAN9-203ENST00000431374 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
TSPAN9-203ENST00000431374 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
TSPAN9-203ENST00000431374 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
TSPAN9-203ENST00000431374 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
TSPAN9-203ENST00000431374 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
TSPAN9-203ENST00000431374 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
TSPAN9-203ENST00000431374 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
TSPAN9-203ENST00000431374 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
TSPAN9-203ENST00000431374 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
TSPAN9-203ENST00000431374 FBLN2P98095 1184 aa26.68■■□□□ 1.86
TSPAN9-203ENST00000431374 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
TSPAN9-203ENST00000431374 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
TSPAN9-203ENST00000431374 CHD1O14646 1710 aa26.6■■□□□ 1.85
TSPAN9-203ENST00000431374 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
TSPAN9-203ENST00000431374 SYNJ2O15056 1496 aa26.58■■□□□ 1.85
TSPAN9-203ENST00000431374 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
TSPAN9-203ENST00000431374 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
TSPAN9-203ENST00000431374 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
TSPAN9-203ENST00000431374 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
TSPAN9-203ENST00000431374 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
TSPAN9-203ENST00000431374 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
TSPAN9-203ENST00000431374 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
TSPAN9-203ENST00000431374 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
TSPAN9-203ENST00000431374 CLASP1Q7Z460 1538 aa26.42■■□□□ 1.82
TSPAN9-203ENST00000431374 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
TSPAN9-203ENST00000431374 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
TSPAN9-203ENST00000431374 KIF27Q86VH2 1401 aa26.34■■□□□ 1.81
TSPAN9-203ENST00000431374 NUP160Q12769 1436 aa26.31■■□□□ 1.8
TSPAN9-203ENST00000431374 IGF1RP08069 1367 aa26.28■■□□□ 1.8
TSPAN9-203ENST00000431374 ARAP1Q96P48 1450 aa26.25■■□□□ 1.79
TSPAN9-203ENST00000431374 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
TSPAN9-203ENST00000431374 CYB5RLQ6IPT4 315 aa26.23■■□□□ 1.79
TSPAN9-203ENST00000431374 CUL7Q14999 1698 aa26.12■■□□□ 1.77
TSPAN9-203ENST00000431374 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
TSPAN9-203ENST00000431374 SHROOM2Q13796 1616 aa26.05■■□□□ 1.76
TSPAN9-203ENST00000431374 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
TSPAN9-203ENST00000431374 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms