RNA–Protein interactions for RNA: ENST00000579546.1

ACADVL-220, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-220ENST00000579546 NISCHQ9Y2I1 1504 aa44.98■■■■■ 4.79
ACADVL-220ENST00000579546 CCDC180Q9P1Z9 1646 aa40.34■■■■■ 4.05
ACADVL-220ENST00000579546 ABCC9O60706 1549 aa40.06■■■■■ 4
ACADVL-220ENST00000579546 RB1CC1Q8TDY2 1594 aa38.24■■■■□ 3.71
ACADVL-220ENST00000579546 NACADO15069 1562 aa38.02■■■■□ 3.68
ACADVL-220ENST00000579546 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
ACADVL-220ENST00000579546 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
ACADVL-220ENST00000579546 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
ACADVL-220ENST00000579546 DNAJC5BQ9UF47 199 aa37.37■■■■□ 3.57
ACADVL-220ENST00000579546 ZCCHC6Q5VYS8 1495 aaKnown RBP37.35■■■■□ 3.57
ACADVL-220ENST00000579546 PABPN1Q86U42 306 aaKnown RBP eCLIP37.27■■■■□ 3.566e-9■■■■■ 36.7
ACADVL-220ENST00000579546 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
ACADVL-220ENST00000579546 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
ACADVL-220ENST00000579546 SCRIBQ14160 1630 aa36.76■■■■□ 3.48
ACADVL-220ENST00000579546 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
ACADVL-220ENST00000579546 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
ACADVL-220ENST00000579546 EIF4G1Q04637 1599 aaKnown RBP36.21■■■■□ 3.39
ACADVL-220ENST00000579546 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
ACADVL-220ENST00000579546 SMARCA4P51532 1647 aa35.08■■■■□ 3.21
ACADVL-220ENST00000579546 NCAPD3P42695 1498 aa35.07■■■■□ 3.2
ACADVL-220ENST00000579546 ATAD2BQ9ULI0 1458 aa35.02■■■■□ 3.2
ACADVL-220ENST00000579546 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
ACADVL-220ENST00000579546 BAZ1AQ9NRL2 1556 aaPredicted RBP34.9■■■■□ 3.18
ACADVL-220ENST00000579546 HMGXB3Q12766 1538 aa34.88■■■■□ 3.17
ACADVL-220ENST00000579546 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
ACADVL-220ENST00000579546 MROH2BQ7Z745 1585 aa34.68■■■■□ 3.14
ACADVL-220ENST00000579546 BAZ1BQ9UIG0 1483 aaKnown RBP34.68■■■■□ 3.14
ACADVL-220ENST00000579546 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
ACADVL-220ENST00000579546 NESP48681 1621 aa34.5■■■■□ 3.11
ACADVL-220ENST00000579546 CUX2O14529 1486 aa34.43■■■■□ 3.1
ACADVL-220ENST00000579546 WIZO95785 1651 aa34.3■■■■□ 3.08
ACADVL-220ENST00000579546 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
ACADVL-220ENST00000579546 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
ACADVL-220ENST00000579546 KIF21AQ7Z4S6 1674 aa34.13■■■■□ 3.05
ACADVL-220ENST00000579546 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
ACADVL-220ENST00000579546 PDS5BQ9NTI5 1447 aa34.01■■■■□ 3.03
ACADVL-220ENST00000579546 RSF1Q96T23 1441 aaPredicted RBP34■■■■□ 3.03
ACADVL-220ENST00000579546 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
ACADVL-220ENST00000579546 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
ACADVL-220ENST00000579546 MRC2Q9UBG0 1479 aa33.76■■■□□ 2.99
ACADVL-220ENST00000579546 WDR62O43379 1518 aa33.7■■■□□ 2.99
ACADVL-220ENST00000579546 CFTRP13569 1480 aa33.69■■■□□ 2.98
ACADVL-220ENST00000579546 CEP164Q9UPV0 1460 aa33.66■■■□□ 2.98
ACADVL-220ENST00000579546 FANCD2Q9BXW9 1451 aa33.64■■■□□ 2.98
ACADVL-220ENST00000579546 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
ACADVL-220ENST00000579546 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
ACADVL-220ENST00000579546 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
ACADVL-220ENST00000579546 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
ACADVL-220ENST00000579546 IFT140Q96RY7 1462 aa32.97■■■□□ 2.87
ACADVL-220ENST00000579546 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
ACADVL-220ENST00000579546 ZNF608Q9ULD9 1512 aaPredicted RBP32.93■■■□□ 2.86
ACADVL-220ENST00000579546 ABCC8Q09428 1581 aa32.93■■■□□ 2.86
ACADVL-220ENST00000579546 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
ACADVL-220ENST00000579546 OSCARQ8IYS5 282 aa32.8■■■□□ 2.84
ACADVL-220ENST00000579546 TARBP1Q13395 1621 aaKnown RBP32.78■■■□□ 2.84
ACADVL-220ENST00000579546 POLA1P09884 1462 aaPredicted RBP32.73■■■□□ 2.83
ACADVL-220ENST00000579546 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
ACADVL-220ENST00000579546 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.812e-8■■■■□ 19.7
ACADVL-220ENST00000579546 RAD54L2Q9Y4B4 1467 aa32.59■■■□□ 2.81
ACADVL-220ENST00000579546 CUX1P39880 1505 aa32.58■■■□□ 2.81
ACADVL-220ENST00000579546 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
ACADVL-220ENST00000579546 FGD5Q6ZNL6 1462 aa32.55■■■□□ 2.8
ACADVL-220ENST00000579546 CHD1O14646 1710 aa32.55■■■□□ 2.8
ACADVL-220ENST00000579546 SOGA1O94964 1423 aa32.51■■■□□ 2.8
ACADVL-220ENST00000579546 RIMBP3CA6NJZ7 1639 aa32.51■■■□□ 2.79
ACADVL-220ENST00000579546 RIMBP3BA6NNM3 1639 aa32.51■■■□□ 2.79
ACADVL-220ENST00000579546 RIMBP3Q9UFD9 1639 aa32.51■■■□□ 2.79
ACADVL-220ENST00000579546 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
ACADVL-220ENST00000579546 TDRD9Q8NDG6 1382 aaKnown RBP32.44■■■□□ 2.78
ACADVL-220ENST00000579546 ARHGEF11O15085 1522 aa32.4■■■□□ 2.78
ACADVL-220ENST00000579546 SNAPC4Q5SXM2 1469 aa32.33■■■□□ 2.77
ACADVL-220ENST00000579546 FBLN2P98095 1184 aa32.29■■■□□ 2.76
ACADVL-220ENST00000579546 GRIN2BQ13224 1484 aa32.24■■■□□ 2.75
ACADVL-220ENST00000579546 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
ACADVL-220ENST00000579546 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
ACADVL-220ENST00000579546 ABCA10Q8WWZ4 1543 aa32.19■■■□□ 2.74
ACADVL-220ENST00000579546 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
ACADVL-220ENST00000579546 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
ACADVL-220ENST00000579546 CLASP1Q7Z460 1538 aa32.15■■■□□ 2.74
ACADVL-220ENST00000579546 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
ACADVL-220ENST00000579546 SYNJ2O15056 1496 aa32.12■■■□□ 2.73
ACADVL-220ENST00000579546 TOP2BQ02880 1626 aa32.11■■■□□ 2.73
ACADVL-220ENST00000579546 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
ACADVL-220ENST00000579546 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
ACADVL-220ENST00000579546 CHMP7Q8WUX9 453 aaPredicted RBP32.08■■■□□ 2.73
ACADVL-220ENST00000579546 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.72
ACADVL-220ENST00000579546 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
ACADVL-220ENST00000579546 ADAMTS12P58397 1594 aa31.92■■■□□ 2.7
ACADVL-220ENST00000579546 GRIN2AQ12879 1464 aa31.85■■■□□ 2.69
ACADVL-220ENST00000579546 ERICH3Q5RHP9 1530 aa31.79■■■□□ 2.68
ACADVL-220ENST00000579546 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
ACADVL-220ENST00000579546 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
ACADVL-220ENST00000579546 NUP160Q12769 1436 aa31.74■■■□□ 2.67
ACADVL-220ENST00000579546 ERCC6L2Q5T890 1561 aa31.67■■■□□ 2.66
ACADVL-220ENST00000579546 SHROOM2Q13796 1616 aa31.63■■■□□ 2.65
ACADVL-220ENST00000579546 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
ACADVL-220ENST00000579546 RUSC2Q8N2Y8 1516 aa31.47■■■□□ 2.63
ACADVL-220ENST00000579546 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
ACADVL-220ENST00000579546 CUL7Q14999 1698 aa31.4■■■□□ 2.62
ACADVL-220ENST00000579546 IGF1RP08069 1367 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms