RNA–Protein interactions for RNA: ENST00000521664.1

NDRG1-220, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-220ENST00000521664 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
NDRG1-220ENST00000521664 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
NDRG1-220ENST00000521664 ABCC9O60706 1549 aa37.14■■■■□ 3.54
NDRG1-220ENST00000521664 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.27
NDRG1-220ENST00000521664 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
NDRG1-220ENST00000521664 NACADO15069 1562 aa35.34■■■■□ 3.25
NDRG1-220ENST00000521664 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
NDRG1-220ENST00000521664 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
NDRG1-220ENST00000521664 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.14
NDRG1-220ENST00000521664 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
NDRG1-220ENST00000521664 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
NDRG1-220ENST00000521664 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
NDRG1-220ENST00000521664 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
NDRG1-220ENST00000521664 SCRIBQ14160 1630 aa34.17■■■■□ 3.06
NDRG1-220ENST00000521664 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
NDRG1-220ENST00000521664 EIF4G1Q04637 1599 aaKnown RBP33.55■■■□□ 2.96
NDRG1-220ENST00000521664 CC2D2AQ9P2K1 1620 aa33.52■■■□□ 2.96
NDRG1-220ENST00000521664 CECR2Q9BXF3 1484 aa33.42■■■□□ 2.94
NDRG1-220ENST00000521664 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
NDRG1-220ENST00000521664 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
NDRG1-220ENST00000521664 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
NDRG1-220ENST00000521664 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
NDRG1-220ENST00000521664 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
NDRG1-220ENST00000521664 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
NDRG1-220ENST00000521664 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
NDRG1-220ENST00000521664 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
NDRG1-220ENST00000521664 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
NDRG1-220ENST00000521664 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
NDRG1-220ENST00000521664 NESP48681 1621 aa31.97■■■□□ 2.71
NDRG1-220ENST00000521664 WIZO95785 1651 aa31.93■■■□□ 2.7
NDRG1-220ENST00000521664 CUX2O14529 1486 aa31.84■■■□□ 2.69
NDRG1-220ENST00000521664 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
NDRG1-220ENST00000521664 RSF1Q96T23 1441 aaPredicted RBP31.82■■■□□ 2.68
NDRG1-220ENST00000521664 PDS5BQ9NTI5 1447 aa31.71■■■□□ 2.67
NDRG1-220ENST00000521664 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
NDRG1-220ENST00000521664 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
NDRG1-220ENST00000521664 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
NDRG1-220ENST00000521664 THOC2Q8NI27 1593 aaKnown RBP31.52■■■□□ 2.64
NDRG1-220ENST00000521664 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
NDRG1-220ENST00000521664 CFTRP13569 1480 aa31.37■■■□□ 2.61
NDRG1-220ENST00000521664 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
NDRG1-220ENST00000521664 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
NDRG1-220ENST00000521664 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
NDRG1-220ENST00000521664 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
NDRG1-220ENST00000521664 WDR62O43379 1518 aa31.22■■■□□ 2.59
NDRG1-220ENST00000521664 PRDM2Q13029 1718 aa31.01■■■□□ 2.56
NDRG1-220ENST00000521664 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
NDRG1-220ENST00000521664 SUPT5HO00267 1087 aaKnown RBP30.83■■■□□ 2.53
NDRG1-220ENST00000521664 ABCC8Q09428 1581 aa30.76■■■□□ 2.52
NDRG1-220ENST00000521664 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
NDRG1-220ENST00000521664 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
NDRG1-220ENST00000521664 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
NDRG1-220ENST00000521664 ZNF608Q9ULD9 1512 aaPredicted RBP30.56■■■□□ 2.48
NDRG1-220ENST00000521664 OSCARQ8IYS5 282 aa30.55■■■□□ 2.48
NDRG1-220ENST00000521664 POLA1P09884 1462 aaPredicted RBP30.45■■■□□ 2.47
NDRG1-220ENST00000521664 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
NDRG1-220ENST00000521664 SOGA1O94964 1423 aa30.39■■■□□ 2.46
NDRG1-220ENST00000521664 EIF4G3O43432 1585 aaKnown RBP30.38■■■□□ 2.45
NDRG1-220ENST00000521664 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.454e-14■■■■■ 55.2
NDRG1-220ENST00000521664 RAD54L2Q9Y4B4 1467 aa30.35■■■□□ 2.45
NDRG1-220ENST00000521664 CUX1P39880 1505 aa30.33■■■□□ 2.45
NDRG1-220ENST00000521664 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
NDRG1-220ENST00000521664 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
NDRG1-220ENST00000521664 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
NDRG1-220ENST00000521664 FBLN2P98095 1184 aa30.22■■■□□ 2.43
NDRG1-220ENST00000521664 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
NDRG1-220ENST00000521664 CHD1O14646 1710 aa30.08■■■□□ 2.41
NDRG1-220ENST00000521664 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
NDRG1-220ENST00000521664 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
NDRG1-220ENST00000521664 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
NDRG1-220ENST00000521664 CHMP7Q8WUX9 453 aaPredicted RBP30.04■■■□□ 2.4
NDRG1-220ENST00000521664 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
NDRG1-220ENST00000521664 GAPVD1Q14C86 1478 aa30■■■□□ 2.39
NDRG1-220ENST00000521664 MAGI1Q96QZ7 1491 aaPredicted RBP30■■■□□ 2.39
NDRG1-220ENST00000521664 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
NDRG1-220ENST00000521664 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
NDRG1-220ENST00000521664 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
NDRG1-220ENST00000521664 TOP2BQ02880 1626 aa29.96■■■□□ 2.39
NDRG1-220ENST00000521664 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
NDRG1-220ENST00000521664 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
NDRG1-220ENST00000521664 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
NDRG1-220ENST00000521664 SYNJ2O15056 1496 aa29.9■■■□□ 2.38
NDRG1-220ENST00000521664 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
NDRG1-220ENST00000521664 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
NDRG1-220ENST00000521664 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
NDRG1-220ENST00000521664 CLASP1Q7Z460 1538 aa29.74■■■□□ 2.35
NDRG1-220ENST00000521664 ARAP1Q96P48 1450 aa29.66■■■□□ 2.34
NDRG1-220ENST00000521664 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
NDRG1-220ENST00000521664 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
NDRG1-220ENST00000521664 ERICH3Q5RHP9 1530 aa29.64■■■□□ 2.34
NDRG1-220ENST00000521664 ADAMTS12P58397 1594 aa29.64■■■□□ 2.33
NDRG1-220ENST00000521664 NUP160Q12769 1436 aa29.51■■■□□ 2.31
NDRG1-220ENST00000521664 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
NDRG1-220ENST00000521664 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
NDRG1-220ENST00000521664 TRHP20396 242 aaPredicted RBP29.41■■■□□ 2.3
NDRG1-220ENST00000521664 IGF1RP08069 1367 aa29.39■■■□□ 2.29
NDRG1-220ENST00000521664 JPH4Q96JJ6 628 aa29.31■■■□□ 2.28
NDRG1-220ENST00000521664 ERCC6L2Q5T890 1561 aa29.3■■■□□ 2.28
NDRG1-220ENST00000521664 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
NDRG1-220ENST00000521664 CUL7Q14999 1698 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms