RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
SPTAN1-202ENST00000372731 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
SPTAN1-202ENST00000372731 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
SPTAN1-202ENST00000372731 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
SPTAN1-202ENST00000372731 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
SPTAN1-202ENST00000372731 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
SPTAN1-202ENST00000372731 APLP2Q06481 763 aa14.57□□□□□ -0.08
SPTAN1-202ENST00000372731 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
SPTAN1-202ENST00000372731 TTBK1Q5TCY1 1321 aaPredicted RBP14.29□□□□□ -0.12
SPTAN1-202ENST00000372731 RANGAP1P46060 587 aaPredicted RBP14.13□□□□□ -0.15
SPTAN1-202ENST00000372731 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
SPTAN1-202ENST00000372731 ERICH6Q7L0X2 663 aa14.06□□□□□ -0.16
SPTAN1-202ENST00000372731 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
SPTAN1-202ENST00000372731 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
SPTAN1-202ENST00000372731 PCGF6Q9BYE7 350 aa13.81□□□□□ -0.2
SPTAN1-202ENST00000372731 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-202ENST00000372731 NEFLP07196 543 aa13.67□□□□□ -0.22
SPTAN1-202ENST00000372731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-202ENST00000372731 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
SPTAN1-202ENST00000372731 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
SPTAN1-202ENST00000372731 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-202ENST00000372731 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
SPTAN1-202ENST00000372731 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
SPTAN1-202ENST00000372731 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
SPTAN1-202ENST00000372731 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-202ENST00000372731 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
SPTAN1-202ENST00000372731 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
SPTAN1-202ENST00000372731 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
SPTAN1-202ENST00000372731 ITGAEP38570 1179 aa13.35□□□□□ -0.27
SPTAN1-202ENST00000372731 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
SPTAN1-202ENST00000372731 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
SPTAN1-202ENST00000372731 MYT1Q01538 1121 aa13.21□□□□□ -0.29
SPTAN1-202ENST00000372731 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.3
SPTAN1-202ENST00000372731 SLC24A1O60721 1099 aa13.21□□□□□ -0.3
SPTAN1-202ENST00000372731 BCANQ96GW7 911 aa13.2□□□□□ -0.3
SPTAN1-202ENST00000372731 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-202ENST00000372731 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-202ENST00000372731 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPTAN1-202ENST00000372731 NEFMP07197 916 aa13.04□□□□□ -0.32
SPTAN1-202ENST00000372731 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-202ENST00000372731 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
SPTAN1-202ENST00000372731 FBLN2P98095 1184 aa12.98□□□□□ -0.33
SPTAN1-202ENST00000372731 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
SPTAN1-202ENST00000372731 ABCC9O60706 1549 aa12.94□□□□□ -0.34
SPTAN1-202ENST00000372731 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-202ENST00000372731 FAM50AQ14320 339 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-202ENST00000372731 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-202ENST00000372731 HRCP23327 699 aa12.87□□□□□ -0.35
SPTAN1-202ENST00000372731 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
SPTAN1-202ENST00000372731 BCL11AQ9H165 835 aa12.87□□□□□ -0.35
SPTAN1-202ENST00000372731 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
SPTAN1-202ENST00000372731 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
SPTAN1-202ENST00000372731 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
SPTAN1-202ENST00000372731 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-202ENST00000372731 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPTAN1-202ENST00000372731 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-202ENST00000372731 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
SPTAN1-202ENST00000372731 A0A0G2JS52 829 aa12.71□□□□□ -0.37
SPTAN1-202ENST00000372731 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
SPTAN1-202ENST00000372731 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-202ENST00000372731 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-202ENST00000372731 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-202ENST00000372731 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-202ENST00000372731 ANP32CO43423 234 aa12.6□□□□□ -0.39
SPTAN1-202ENST00000372731 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-202ENST00000372731 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
SPTAN1-202ENST00000372731 HSP90AA1P07900 732 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-202ENST00000372731 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-202ENST00000372731 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
SPTAN1-202ENST00000372731 ZBTB7CA1YPR0 619 aa12.48□□□□□ -0.41
SPTAN1-202ENST00000372731 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
SPTAN1-202ENST00000372731 UPF2Q9HAU5 1272 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-202ENST00000372731 NPHP1O15259 732 aa12.42□□□□□ -0.42
SPTAN1-202ENST00000372731 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
SPTAN1-202ENST00000372731 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
SPTAN1-202ENST00000372731 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-202ENST00000372731 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
SPTAN1-202ENST00000372731 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-202ENST00000372731 ANP32AP39687 249 aaKnown RBP12.38□□□□□ -0.43
SPTAN1-202ENST00000372731 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
SPTAN1-202ENST00000372731 ARXQ96QS3 562 aa12.36□□□□□ -0.43
SPTAN1-202ENST00000372731 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
SPTAN1-202ENST00000372731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■■■□□ 15.9
SPTAN1-202ENST00000372731 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-202ENST00000372731 CHIC2Q9UKJ5 165 aa12.3□□□□□ -0.44
SPTAN1-202ENST00000372731 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
SPTAN1-202ENST00000372731 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
SPTAN1-202ENST00000372731 WDR43Q15061 677 aaKnown RBP eCLIP12.27□□□□□ -0.442e-6■■■□□ 18.6
SPTAN1-202ENST00000372731 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
SPTAN1-202ENST00000372731 TSPY4P0CV99 314 aa12.22□□□□□ -0.45
SPTAN1-202ENST00000372731 TSPY10P0CW01 314 aa12.22□□□□□ -0.45
SPTAN1-202ENST00000372731 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
SPTAN1-202ENST00000372731 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-202ENST00000372731 ZRSR1Q15695 479 aaKnown RBP12.21□□□□□ -0.46
SPTAN1-202ENST00000372731 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
SPTAN1-202ENST00000372731 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
SPTAN1-202ENST00000372731 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
SPTAN1-202ENST00000372731 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-202ENST00000372731 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
SPTAN1-202ENST00000372731 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms