RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
SNU13-204ENST00000402458 CCDC180Q9P1Z9 1646 aa28.59■■■□□ 2.17
SNU13-204ENST00000402458 ABCC9O60706 1549 aa27.62■■■□□ 2.01
SNU13-204ENST00000402458 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
SNU13-204ENST00000402458 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
SNU13-204ENST00000402458 NACADO15069 1562 aa26.8■■□□□ 1.88
SNU13-204ENST00000402458 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
SNU13-204ENST00000402458 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
SNU13-204ENST00000402458 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
SNU13-204ENST00000402458 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
SNU13-204ENST00000402458 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
SNU13-204ENST00000402458 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
SNU13-204ENST00000402458 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
SNU13-204ENST00000402458 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
SNU13-204ENST00000402458 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
SNU13-204ENST00000402458 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
SNU13-204ENST00000402458 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
SNU13-204ENST00000402458 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
SNU13-204ENST00000402458 SMARCA4P51532 1647 aa25■■□□□ 1.59
SNU13-204ENST00000402458 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
SNU13-204ENST00000402458 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
SNU13-204ENST00000402458 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
SNU13-204ENST00000402458 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
SNU13-204ENST00000402458 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
SNU13-204ENST00000402458 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
SNU13-204ENST00000402458 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
SNU13-204ENST00000402458 WIZO95785 1651 aa24.66■■□□□ 1.54
SNU13-204ENST00000402458 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
SNU13-204ENST00000402458 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
SNU13-204ENST00000402458 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
SNU13-204ENST00000402458 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
SNU13-204ENST00000402458 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
SNU13-204ENST00000402458 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SNU13-204ENST00000402458 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
SNU13-204ENST00000402458 NESP48681 1621 aa23.98■■□□□ 1.43
SNU13-204ENST00000402458 CFTRP13569 1480 aa23.93■■□□□ 1.42
SNU13-204ENST00000402458 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
SNU13-204ENST00000402458 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
SNU13-204ENST00000402458 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
SNU13-204ENST00000402458 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
SNU13-204ENST00000402458 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
SNU13-204ENST00000402458 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
SNU13-204ENST00000402458 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
SNU13-204ENST00000402458 THOC2Q8NI27 1593 aaKnown RBP23.55■■□□□ 1.36
SNU13-204ENST00000402458 WDR62O43379 1518 aa23.47■■□□□ 1.35
SNU13-204ENST00000402458 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
SNU13-204ENST00000402458 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
SNU13-204ENST00000402458 CUX2O14529 1486 aa23.43■■□□□ 1.34
SNU13-204ENST00000402458 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
SNU13-204ENST00000402458 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
SNU13-204ENST00000402458 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
SNU13-204ENST00000402458 CUX1P39880 1505 aa23.33■■□□□ 1.32
SNU13-204ENST00000402458 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
SNU13-204ENST00000402458 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
SNU13-204ENST00000402458 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
SNU13-204ENST00000402458 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
SNU13-204ENST00000402458 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
SNU13-204ENST00000402458 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
SNU13-204ENST00000402458 SOGA1O94964 1423 aa23.16■■□□□ 1.3
SNU13-204ENST00000402458 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
SNU13-204ENST00000402458 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
SNU13-204ENST00000402458 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
SNU13-204ENST00000402458 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
SNU13-204ENST00000402458 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SNU13-204ENST00000402458 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
SNU13-204ENST00000402458 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SNU13-204ENST00000402458 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
SNU13-204ENST00000402458 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
SNU13-204ENST00000402458 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.261e-20■■■■■ 27.6
SNU13-204ENST00000402458 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.25
SNU13-204ENST00000402458 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
SNU13-204ENST00000402458 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
SNU13-204ENST00000402458 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
SNU13-204ENST00000402458 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
SNU13-204ENST00000402458 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
SNU13-204ENST00000402458 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
SNU13-204ENST00000402458 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
SNU13-204ENST00000402458 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
SNU13-204ENST00000402458 EEA1Q15075 1411 aa22.66■■□□□ 1.22
SNU13-204ENST00000402458 IGF1RP08069 1367 aa22.66■■□□□ 1.22
SNU13-204ENST00000402458 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SNU13-204ENST00000402458 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
SNU13-204ENST00000402458 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
SNU13-204ENST00000402458 CUL7Q14999 1698 aa22.65■■□□□ 1.22
SNU13-204ENST00000402458 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
SNU13-204ENST00000402458 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
SNU13-204ENST00000402458 CHD1O14646 1710 aa22.62■■□□□ 1.21
SNU13-204ENST00000402458 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
SNU13-204ENST00000402458 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
SNU13-204ENST00000402458 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
SNU13-204ENST00000402458 OSCARQ8IYS5 282 aa22.55■■□□□ 1.2
SNU13-204ENST00000402458 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
SNU13-204ENST00000402458 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
SNU13-204ENST00000402458 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
SNU13-204ENST00000402458 NUP160Q12769 1436 aa22.4■■□□□ 1.18
SNU13-204ENST00000402458 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
SNU13-204ENST00000402458 KIF21BO75037 1637 aa22.37■■□□□ 1.17
SNU13-204ENST00000402458 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
SNU13-204ENST00000402458 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
SNU13-204ENST00000402458 DNAJC5Q9H3Z4 198 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms