RNA–Protein interactions for RNA: ENST00000311160.13

TNS3-201, Transcript of tensin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNS3, Length 7,618 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-201ENST00000311160 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
TNS3-201ENST00000311160 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
TNS3-201ENST00000311160 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
TNS3-201ENST00000311160 MYT1Q01538 1121 aa17.12■□□□□ 0.33
TNS3-201ENST00000311160 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
TNS3-201ENST00000311160 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
TNS3-201ENST00000311160 APLP2Q06481 763 aa16.6■□□□□ 0.25
TNS3-201ENST00000311160 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
TNS3-201ENST00000311160 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
TNS3-201ENST00000311160 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
TNS3-201ENST00000311160 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
TNS3-201ENST00000311160 NEFLP07196 543 aa16.31■□□□□ 0.2
TNS3-201ENST00000311160 ATP1B4Q9UN42 357 aaPredicted RBP16.22■□□□□ 0.19
TNS3-201ENST00000311160 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
TNS3-201ENST00000311160 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
TNS3-201ENST00000311160 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
TNS3-201ENST00000311160 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
TNS3-201ENST00000311160 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
TNS3-201ENST00000311160 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
TNS3-201ENST00000311160 POLR3GLQ9BT43 218 aa15.95■□□□□ 0.14
TNS3-201ENST00000311160 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
TNS3-201ENST00000311160 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
TNS3-201ENST00000311160 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
TNS3-201ENST00000311160 CLSPNQ9HAW4 1339 aa15.85■□□□□ 0.13
TNS3-201ENST00000311160 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
TNS3-201ENST00000311160 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
TNS3-201ENST00000311160 BCL11AQ9H165 835 aa15.68■□□□□ 0.1
TNS3-201ENST00000311160 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
TNS3-201ENST00000311160 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
TNS3-201ENST00000311160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
TNS3-201ENST00000311160 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
TNS3-201ENST00000311160 ZEB1P37275 1124 aaPredicted RBP15.41■□□□□ 0.06
TNS3-201ENST00000311160 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
TNS3-201ENST00000311160 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
TNS3-201ENST00000311160 ITGAEP38570 1179 aa15.31■□□□□ 0.04
TNS3-201ENST00000311160 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
TNS3-201ENST00000311160 CDK11BP21127 795 aaKnown RBP15.22■□□□□ 0.03
TNS3-201ENST00000311160 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
TNS3-201ENST00000311160 ANP32BQ92688 251 aaKnown RBP15.12■□□□□ 0.01
TNS3-201ENST00000311160 CANXP27824 592 aaKnown RBP15.12■□□□□ 0.01
TNS3-201ENST00000311160 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
TNS3-201ENST00000311160 BCANQ96GW7 911 aa15.09■□□□□ 0.01
TNS3-201ENST00000311160 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
TNS3-201ENST00000311160 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
TNS3-201ENST00000311160 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
TNS3-201ENST00000311160 TRIM41Q8WV44 630 aa15□□□□□ -0.01
TNS3-201ENST00000311160 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
TNS3-201ENST00000311160 NEFMP07197 916 aa14.96□□□□□ -0.01
TNS3-201ENST00000311160 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
TNS3-201ENST00000311160 ARXQ96QS3 562 aa14.92□□□□□ -0.02
TNS3-201ENST00000311160 A0A0G2JS52 829 aa14.89□□□□□ -0.03
TNS3-201ENST00000311160 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
TNS3-201ENST00000311160 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
TNS3-201ENST00000311160 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.04
TNS3-201ENST00000311160 TRIM52Q96A61 297 aa14.74□□□□□ -0.05
TNS3-201ENST00000311160 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
TNS3-201ENST00000311160 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
TNS3-201ENST00000311160 PRM3Q9NNZ6 103 aa14.65□□□□□ -0.06
TNS3-201ENST00000311160 NEUROD1Q13562 356 aa14.65□□□□□ -0.06
TNS3-201ENST00000311160 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
TNS3-201ENST00000311160 TNNT2P45379 298 aaPredicted RBP14.63□□□□□ -0.07
TNS3-201ENST00000311160 HRCP23327 699 aa14.61□□□□□ -0.07
TNS3-201ENST00000311160 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
TNS3-201ENST00000311160 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
TNS3-201ENST00000311160 TPRNQ4KMQ1 711 aa14.57□□□□□ -0.08
TNS3-201ENST00000311160 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
TNS3-201ENST00000311160 CLSTN1O94985 981 aa14.56□□□□□ -0.08
TNS3-201ENST00000311160 ANP32CO43423 234 aa14.55□□□□□ -0.08
TNS3-201ENST00000311160 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
TNS3-201ENST00000311160 NBR1Q14596 966 aa14.54□□□□□ -0.08
TNS3-201ENST00000311160 TRIM44Q96DX7 344 aaPredicted RBP14.54□□□□□ -0.08
TNS3-201ENST00000311160 ESF1Q9H501 851 aaKnown RBP14.5□□□□□ -0.09
TNS3-201ENST00000311160 ZRSR1Q15695 479 aaKnown RBP14.48□□□□□ -0.09
TNS3-201ENST00000311160 DNTTIP2Q5QJE6 756 aaKnown RBP14.47□□□□□ -0.09
TNS3-201ENST00000311160 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
TNS3-201ENST00000311160 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
TNS3-201ENST00000311160 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
TNS3-201ENST00000311160 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
TNS3-201ENST00000311160 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
TNS3-201ENST00000311160 KRI1Q8N9T8 703 aaKnown RBP14.39□□□□□ -0.11
TNS3-201ENST00000311160 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
TNS3-201ENST00000311160 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
TNS3-201ENST00000311160 CHGAP10645 457 aaKnown RBP14.36□□□□□ -0.11
TNS3-201ENST00000311160 NPHP1O15259 732 aa14.36□□□□□ -0.11
TNS3-201ENST00000311160 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
TNS3-201ENST00000311160 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
TNS3-201ENST00000311160 FBLN2P98095 1184 aa14.3□□□□□ -0.12
TNS3-201ENST00000311160 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
TNS3-201ENST00000311160 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
TNS3-201ENST00000311160 PDE4CQ08493 712 aa14.28□□□□□ -0.12
TNS3-201ENST00000311160 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
TNS3-201ENST00000311160 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
TNS3-201ENST00000311160 NOC3LQ8WTT2 800 aaKnown RBP14.22□□□□□ -0.13
TNS3-201ENST00000311160 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
TNS3-201ENST00000311160 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.14
TNS3-201ENST00000311160 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
TNS3-201ENST00000311160 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
TNS3-201ENST00000311160 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
TNS3-201ENST00000311160 GOLGA6L22H0YM25 854 aa14.18□□□□□ -0.14
TNS3-201ENST00000311160 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms