Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)19.41■□□□□ 0.73e-6■■□□□ 12.8
DROSHAQ9NRR4 C1QTNF6-207ENST00000497071 688 ntTSL 319.4■□□□□ 0.73e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC19.16■□□□□ 0.663e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC18.93■□□□□ 0.623e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-208ENST00000558970 730 ntTSL 518.88■□□□□ 0.613e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-204ENST00000419781 5414 ntTSL 1 (best)18.79■□□□□ 0.63e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.573e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC18.38■□□□□ 0.533e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC18.38■□□□□ 0.533e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-241ENST00000552915 1071 ntTSL 518.31■□□□□ 0.523e-6■■□□□ 12.8
DROSHAQ9NRR4 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.523e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-223ENST00000550160 993 ntTSL 517.65■□□□□ 0.423e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC17.46■□□□□ 0.393e-6■■□□□ 12.8
DROSHAQ9NRR4 MIR600HG-202ENST00000545631 5977 nt17.29■□□□□ 0.363e-6■■□□□ 12.8
DROSHAQ9NRR4 MIR600HG-201ENST00000449175 5984 ntBASIC17.29■□□□□ 0.363e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-208ENST00000452839 2363 ntTSL 216.79■□□□□ 0.283e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-239ENST00000552483 895 ntTSL 516.7■□□□□ 0.263e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-214ENST00000528548 579 ntTSL 416.7■□□□□ 0.261e-12■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC16.68■□□□□ 0.263e-6■■□□□ 12.8
DROSHAQ9NRR4 PHF19-206ENST00000453868 565 ntTSL 516.12■□□□□ 0.173e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.143e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.123e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-212ENST00000545885 559 ntTSL 215.75■□□□□ 0.113e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC15.72■□□□□ 0.113e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC15.64■□□□□ 0.093e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-206ENST00000526138 557 ntTSL 415.49■□□□□ 0.071e-12■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-242ENST00000553020 576 ntTSL 515.07■□□□□ 03e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-229ENST00000551179 355 ntTSL 215.07■□□□□ 03e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-228ENST00000551132 618 ntTSL 315.07■□□□□ 03e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-243ENST00000553078 440 ntTSL 315.07■□□□□ 03e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-205ENST00000547321 577 ntTSL 215.07■□□□□ 03e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.063e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-214ENST00000548741 536 ntTSL 414.49□□□□□ -0.093e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-203ENST00000526592 861 ntTSL 3 BASIC14.44□□□□□ -0.13e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-232ENST00000551661 571 ntTSL 413.96□□□□□ -0.173e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.33e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-208ENST00000548021 724 ntTSL 212.76□□□□□ -0.373e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-225ENST00000550641 964 ntTSL 512.76□□□□□ -0.373e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC12.55□□□□□ -0.43e-6■■□□□ 12.8
DROSHAQ9NRR4 STRBP-206ENST00000478973 663 ntTSL 512.01□□□□□ -0.493e-6■■□□□ 12.8
DROSHAQ9NRR4 STRBP-210ENST00000530364 285 ntTSL 311.89□□□□□ -0.513e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-207ENST00000530923 717 ntTSL 511.89□□□□□ -0.513e-6■■□□□ 12.8
DROSHAQ9NRR4 STRBP-205ENST00000471564 535 ntTSL 511.79□□□□□ -0.523e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC11.28□□□□□ -0.63e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-217ENST00000549443 457 ntTSL 411.25□□□□□ -0.613e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-237ENST00000552319 783 ntTSL 511.25□□□□□ -0.613e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.633e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.643e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.683e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.683e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-222ENST00000556570 477 ntTSL 510.81□□□□□ -0.683e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-209ENST00000367047 3089 ntTSL 5 BASIC10.6□□□□□ -0.713e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.723e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.723e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-238ENST00000552422 443 ntTSL 310.21□□□□□ -0.783e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC10.1□□□□□ -0.793e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC10.04□□□□□ -0.83e-6■■□□□ 12.8
DROSHAQ9NRR4 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.873e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-229ENST00000557621 759 ntTSL 58.48□□□□□ -1.053e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-212ENST00000469535 7826 ntTSL 1 (best)8.11□□□□□ -1.113e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.213e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-219ENST00000556307 601 ntTSL 37.38□□□□□ -1.233e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-209ENST00000464932 723 ntTSL 37.28□□□□□ -1.243e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.293e-6■■□□□ 12.8
DROSHAQ9NRR4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.343e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.09□□□□□ -1.63e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.67□□□□□ -1.663e-6■■□□□ 12.8
DROSHAQ9NRR4 CD46-217ENST00000493796 408 ntTSL 54.09□□□□□ -1.753e-6■■□□□ 12.8
DROSHAQ9NRR4 ARF1-208ENST00000478336 930 ntTSL 236.85■■■■□ 3.497e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-206ENST00000473949 578 ntTSL 532.43■■■□□ 2.787e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.867e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-207ENST00000477451 789 ntTSL 526.07■■□□□ 1.767e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-202ENST00000469235 678 ntTSL 324.14■■□□□ 1.457e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-203ENST00000470558 820 ntTSL 223.97■■□□□ 1.437e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-212ENST00000497165 675 ntTSL 323.97■■□□□ 1.437e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-210ENST00000482962 597 ntTSL 323■■□□□ 1.277e-9■■□□□ 12.8
DROSHAQ9NRR4 ARF1-205ENST00000473546 291 ntTSL 220.39■□□□□ 0.857e-9■■□□□ 12.8
DROSHAQ9NRR4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC39.33■■■■□ 3.898e-7■■□□□ 12.8
DROSHAQ9NRR4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.858e-7■■□□□ 12.8
DROSHAQ9NRR4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC37.08■■■■□ 3.538e-7■■□□□ 12.8
DROSHAQ9NRR4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC25.19■■□□□ 1.628e-7■■□□□ 12.8
DROSHAQ9NRR4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC19.08■□□□□ 0.658e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-212ENST00000480679 505 ntTSL 532.31■■■□□ 2.767e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-223ENST00000493222 864 ntTSL 332.31■■■□□ 2.767e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-227ENST00000497510 722 ntTSL 430.88■■■□□ 2.537e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-219ENST00000487469 1015 ntTSL 529.1■■■□□ 2.257e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-213ENST00000482668 645 ntTSL 328.5■■■□□ 2.157e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-215ENST00000483461 495 ntTSL 427.64■■■□□ 2.027e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-205ENST00000466642 1023 ntTSL 427.59■■■□□ 2.017e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.9■■□□□ 1.747e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-214ENST00000483108 598 ntTSL 425.3■■□□□ 1.647e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-217ENST00000484142 553 ntTSL 425.3■■□□□ 1.647e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-206ENST00000467400 717 ntTSL 524.61■■□□□ 1.537e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.18■□□□□ 0.987e-7■■□□□ 12.8
DROSHAQ9NRR4 UGP2-220ENST00000487640 566 ntTSL 411.86□□□□□ -0.517e-7■■□□□ 12.8
DROSHAQ9NRR4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.891e-6■■□□□ 12.8
DROSHAQ9NRR4 PUM2-211ENST00000446940 525 ntTSL 422.43■■□□□ 1.181e-8■■□□□ 12.8
Retrieved 100 of 16,331 protein–RNA pairs in 78.6 ms