RNA–Protein interactions for RNA: ENST00000473546.1

ARF1-205, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-205ENST00000473546 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
ARF1-205ENST00000473546 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
ARF1-205ENST00000473546 ABCC9O60706 1549 aa28.99■■■□□ 2.23
ARF1-205ENST00000473546 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
ARF1-205ENST00000473546 NACADO15069 1562 aa27.6■■■□□ 2.01
ARF1-205ENST00000473546 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
ARF1-205ENST00000473546 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
ARF1-205ENST00000473546 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
ARF1-205ENST00000473546 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
ARF1-205ENST00000473546 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
ARF1-205ENST00000473546 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
ARF1-205ENST00000473546 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
ARF1-205ENST00000473546 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
ARF1-205ENST00000473546 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
ARF1-205ENST00000473546 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
ARF1-205ENST00000473546 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
ARF1-205ENST00000473546 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
ARF1-205ENST00000473546 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
ARF1-205ENST00000473546 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
ARF1-205ENST00000473546 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
ARF1-205ENST00000473546 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
ARF1-205ENST00000473546 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
ARF1-205ENST00000473546 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
ARF1-205ENST00000473546 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
ARF1-205ENST00000473546 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
ARF1-205ENST00000473546 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
ARF1-205ENST00000473546 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
ARF1-205ENST00000473546 WIZO95785 1651 aa25.23■■□□□ 1.63
ARF1-205ENST00000473546 NESP48681 1621 aa25.08■■□□□ 1.61
ARF1-205ENST00000473546 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
ARF1-205ENST00000473546 ERCC6Q03468 1493 aa24.89■■□□□ 1.57
ARF1-205ENST00000473546 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
ARF1-205ENST00000473546 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
ARF1-205ENST00000473546 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
ARF1-205ENST00000473546 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
ARF1-205ENST00000473546 CUX2O14529 1486 aa24.69■■□□□ 1.54
ARF1-205ENST00000473546 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
ARF1-205ENST00000473546 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
ARF1-205ENST00000473546 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
ARF1-205ENST00000473546 CFTRP13569 1480 aa24.53■■□□□ 1.52
ARF1-205ENST00000473546 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
ARF1-205ENST00000473546 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
ARF1-205ENST00000473546 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
ARF1-205ENST00000473546 WDR62O43379 1518 aa24.45■■□□□ 1.5
ARF1-205ENST00000473546 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
ARF1-205ENST00000473546 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
ARF1-205ENST00000473546 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
ARF1-205ENST00000473546 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
ARF1-205ENST00000473546 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
ARF1-205ENST00000473546 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
ARF1-205ENST00000473546 ZNF608Q9ULD9 1512 aaPredicted RBP23.95■■□□□ 1.43
ARF1-205ENST00000473546 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
ARF1-205ENST00000473546 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
ARF1-205ENST00000473546 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
ARF1-205ENST00000473546 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
ARF1-205ENST00000473546 CUX1P39880 1505 aa23.89■■□□□ 1.41
ARF1-205ENST00000473546 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
ARF1-205ENST00000473546 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
ARF1-205ENST00000473546 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
ARF1-205ENST00000473546 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
ARF1-205ENST00000473546 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.394e-6■■■□□ 15.3
ARF1-205ENST00000473546 CHD1O14646 1710 aa23.7■■□□□ 1.39
ARF1-205ENST00000473546 SOGA1O94964 1423 aa23.67■■□□□ 1.38
ARF1-205ENST00000473546 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
ARF1-205ENST00000473546 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
ARF1-205ENST00000473546 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
ARF1-205ENST00000473546 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
ARF1-205ENST00000473546 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
ARF1-205ENST00000473546 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
ARF1-205ENST00000473546 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
ARF1-205ENST00000473546 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
ARF1-205ENST00000473546 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
ARF1-205ENST00000473546 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
ARF1-205ENST00000473546 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
ARF1-205ENST00000473546 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
ARF1-205ENST00000473546 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
ARF1-205ENST00000473546 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
ARF1-205ENST00000473546 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
ARF1-205ENST00000473546 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
ARF1-205ENST00000473546 FBLN2P98095 1184 aa23.36■■□□□ 1.33
ARF1-205ENST00000473546 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
ARF1-205ENST00000473546 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
ARF1-205ENST00000473546 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
ARF1-205ENST00000473546 SYNJ2O15056 1496 aa23.32■■□□□ 1.32
ARF1-205ENST00000473546 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
ARF1-205ENST00000473546 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
ARF1-205ENST00000473546 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
ARF1-205ENST00000473546 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
ARF1-205ENST00000473546 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
ARF1-205ENST00000473546 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
ARF1-205ENST00000473546 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
ARF1-205ENST00000473546 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
ARF1-205ENST00000473546 NUP160Q12769 1436 aa23.08■■□□□ 1.28
ARF1-205ENST00000473546 SHROOM2Q13796 1616 aa23.04■■□□□ 1.28
ARF1-205ENST00000473546 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
ARF1-205ENST00000473546 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
ARF1-205ENST00000473546 CUL7Q14999 1698 aa23■■□□□ 1.27
ARF1-205ENST00000473546 KIF27Q86VH2 1401 aa22.99■■□□□ 1.27
ARF1-205ENST00000473546 IGF1RP08069 1367 aa22.96■■□□□ 1.27
ARF1-205ENST00000473546 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms