RNA–Protein interactions for RNA: ENST00000470558.5

ARF1-203, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-203ENST00000470558 NISCHQ9Y2I1 1504 aa37.89■■■■□ 3.66
ARF1-203ENST00000470558 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
ARF1-203ENST00000470558 ABCC9O60706 1549 aa32.84■■■□□ 2.85
ARF1-203ENST00000470558 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
ARF1-203ENST00000470558 NACADO15069 1562 aa31.64■■■□□ 2.65
ARF1-203ENST00000470558 DCAF8L2P0C7V8 631 aa31.62■■■□□ 2.65
ARF1-203ENST00000470558 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
ARF1-203ENST00000470558 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
ARF1-203ENST00000470558 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
ARF1-203ENST00000470558 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
ARF1-203ENST00000470558 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
ARF1-203ENST00000470558 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
ARF1-203ENST00000470558 PABPN1Q86U42 306 aaKnown RBP eCLIP30.69■■■□□ 2.5
ARF1-203ENST00000470558 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
ARF1-203ENST00000470558 DNAJC5BQ9UF47 199 aa30.07■■■□□ 2.4
ARF1-203ENST00000470558 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
ARF1-203ENST00000470558 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
ARF1-203ENST00000470558 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
ARF1-203ENST00000470558 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
ARF1-203ENST00000470558 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
ARF1-203ENST00000470558 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
ARF1-203ENST00000470558 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
ARF1-203ENST00000470558 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
ARF1-203ENST00000470558 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
ARF1-203ENST00000470558 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
ARF1-203ENST00000470558 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
ARF1-203ENST00000470558 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
ARF1-203ENST00000470558 WIZO95785 1651 aa28.94■■■□□ 2.22
ARF1-203ENST00000470558 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
ARF1-203ENST00000470558 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
ARF1-203ENST00000470558 NESP48681 1621 aa28.45■■■□□ 2.14
ARF1-203ENST00000470558 LAMC3Q9Y6N6 1575 aa28.42■■■□□ 2.14
ARF1-203ENST00000470558 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
ARF1-203ENST00000470558 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
ARF1-203ENST00000470558 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
ARF1-203ENST00000470558 KIF21AQ7Z4S6 1674 aa28.21■■■□□ 2.11
ARF1-203ENST00000470558 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
ARF1-203ENST00000470558 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
ARF1-203ENST00000470558 CFTRP13569 1480 aa28.16■■■□□ 2.1
ARF1-203ENST00000470558 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
ARF1-203ENST00000470558 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
ARF1-203ENST00000470558 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
ARF1-203ENST00000470558 CUX2O14529 1486 aa27.98■■■□□ 2.07
ARF1-203ENST00000470558 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
ARF1-203ENST00000470558 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
ARF1-203ENST00000470558 WDR62O43379 1518 aa27.82■■■□□ 2.04
ARF1-203ENST00000470558 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
ARF1-203ENST00000470558 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
ARF1-203ENST00000470558 TOPBP1Q92547 1522 aa27.57■■■□□ 2
ARF1-203ENST00000470558 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
ARF1-203ENST00000470558 CUX1P39880 1505 aa27.38■■□□□ 1.97
ARF1-203ENST00000470558 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
ARF1-203ENST00000470558 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
ARF1-203ENST00000470558 TARBP1Q13395 1621 aaKnown RBP27.3■■□□□ 1.96
ARF1-203ENST00000470558 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
ARF1-203ENST00000470558 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
ARF1-203ENST00000470558 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
ARF1-203ENST00000470558 SOGA1O94964 1423 aa27.22■■□□□ 1.95
ARF1-203ENST00000470558 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.956e-7■■■■■ 33.4
ARF1-203ENST00000470558 RAD54L2Q9Y4B4 1467 aa27.21■■□□□ 1.95
ARF1-203ENST00000470558 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
ARF1-203ENST00000470558 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
ARF1-203ENST00000470558 EIF4G3O43432 1585 aaKnown RBP27.16■■□□□ 1.94
ARF1-203ENST00000470558 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
ARF1-203ENST00000470558 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.935e-7■■■■□ 21.3
ARF1-203ENST00000470558 DNAJC5Q9H3Z4 198 aa27.04■■□□□ 1.92
ARF1-203ENST00000470558 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
ARF1-203ENST00000470558 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
ARF1-203ENST00000470558 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
ARF1-203ENST00000470558 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
ARF1-203ENST00000470558 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
ARF1-203ENST00000470558 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
ARF1-203ENST00000470558 CHD1O14646 1710 aa26.88■■□□□ 1.89
ARF1-203ENST00000470558 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
ARF1-203ENST00000470558 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
ARF1-203ENST00000470558 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
ARF1-203ENST00000470558 FBLN2P98095 1184 aa26.76■■□□□ 1.87
ARF1-203ENST00000470558 ERICH3Q5RHP9 1530 aa26.71■■□□□ 1.87
ARF1-203ENST00000470558 SYNJ2O15056 1496 aa26.71■■□□□ 1.87
ARF1-203ENST00000470558 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
ARF1-203ENST00000470558 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
ARF1-203ENST00000470558 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
ARF1-203ENST00000470558 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
ARF1-203ENST00000470558 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
ARF1-203ENST00000470558 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
ARF1-203ENST00000470558 IGF1RP08069 1367 aa26.54■■□□□ 1.84
ARF1-203ENST00000470558 CUL7Q14999 1698 aa26.52■■□□□ 1.84
ARF1-203ENST00000470558 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
ARF1-203ENST00000470558 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
ARF1-203ENST00000470558 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
ARF1-203ENST00000470558 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
ARF1-203ENST00000470558 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
ARF1-203ENST00000470558 CEP170Q5SW79 1584 aa26.43■■□□□ 1.82
ARF1-203ENST00000470558 NUP160Q12769 1436 aa26.41■■□□□ 1.82
ARF1-203ENST00000470558 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
ARF1-203ENST00000470558 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.82
ARF1-203ENST00000470558 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
ARF1-203ENST00000470558 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
ARF1-203ENST00000470558 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
ARF1-203ENST00000470558 KIAA0586Q9BVV6 1533 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms