RNA–Protein interactions for RNA: ENST00000379789.8

PFKFB3-205, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best) BASIC

Gene PFKFB3, Length 4,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-205ENST00000379789 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
PFKFB3-205ENST00000379789 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
PFKFB3-205ENST00000379789 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
PFKFB3-205ENST00000379789 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
PFKFB3-205ENST00000379789 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
PFKFB3-205ENST00000379789 ZCCHC6Q5VYS8 1495 aaKnown RBP19.25■□□□□ 0.67
PFKFB3-205ENST00000379789 ABCC9O60706 1549 aa19.13■□□□□ 0.65
PFKFB3-205ENST00000379789 SCRIBQ14160 1630 aa18.64■□□□□ 0.57
PFKFB3-205ENST00000379789 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
PFKFB3-205ENST00000379789 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
PFKFB3-205ENST00000379789 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
PFKFB3-205ENST00000379789 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
PFKFB3-205ENST00000379789 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
PFKFB3-205ENST00000379789 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
PFKFB3-205ENST00000379789 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
PFKFB3-205ENST00000379789 NACADO15069 1562 aa18.28■□□□□ 0.52
PFKFB3-205ENST00000379789 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
PFKFB3-205ENST00000379789 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
PFKFB3-205ENST00000379789 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PFKFB3-205ENST00000379789 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
PFKFB3-205ENST00000379789 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
PFKFB3-205ENST00000379789 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
PFKFB3-205ENST00000379789 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
PFKFB3-205ENST00000379789 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.44
PFKFB3-205ENST00000379789 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
PFKFB3-205ENST00000379789 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
PFKFB3-205ENST00000379789 WIZO95785 1651 aa17.76■□□□□ 0.43
PFKFB3-205ENST00000379789 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
PFKFB3-205ENST00000379789 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
PFKFB3-205ENST00000379789 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
PFKFB3-205ENST00000379789 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
PFKFB3-205ENST00000379789 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
PFKFB3-205ENST00000379789 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
PFKFB3-205ENST00000379789 APLP2Q06481 763 aa17.43■□□□□ 0.38
PFKFB3-205ENST00000379789 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
PFKFB3-205ENST00000379789 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
PFKFB3-205ENST00000379789 HRCP23327 699 aa17.41■□□□□ 0.38
PFKFB3-205ENST00000379789 UNC13AQ9UPW8 1703 aa17.4■□□□□ 0.38
PFKFB3-205ENST00000379789 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.38
PFKFB3-205ENST00000379789 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
PFKFB3-205ENST00000379789 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.365e-6■■■■□ 23
PFKFB3-205ENST00000379789 SOGA1O94964 1423 aa17.3■□□□□ 0.36
PFKFB3-205ENST00000379789 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
PFKFB3-205ENST00000379789 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
PFKFB3-205ENST00000379789 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
PFKFB3-205ENST00000379789 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
PFKFB3-205ENST00000379789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
PFKFB3-205ENST00000379789 RUSC2Q8N2Y8 1516 aa17.15■□□□□ 0.34
PFKFB3-205ENST00000379789 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
PFKFB3-205ENST00000379789 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
PFKFB3-205ENST00000379789 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
PFKFB3-205ENST00000379789 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
PFKFB3-205ENST00000379789 EEA1Q15075 1411 aa17.03■□□□□ 0.32
PFKFB3-205ENST00000379789 P3H3Q8IVL6 736 aa17.02■□□□□ 0.31
PFKFB3-205ENST00000379789 ITGAEP38570 1179 aa17■□□□□ 0.31
PFKFB3-205ENST00000379789 NCAPD3P42695 1498 aa17■□□□□ 0.31
PFKFB3-205ENST00000379789 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
PFKFB3-205ENST00000379789 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
PFKFB3-205ENST00000379789 CLIP1P30622 1438 aa16.94■□□□□ 0.3
PFKFB3-205ENST00000379789 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
PFKFB3-205ENST00000379789 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
PFKFB3-205ENST00000379789 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
PFKFB3-205ENST00000379789 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
PFKFB3-205ENST00000379789 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
PFKFB3-205ENST00000379789 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
PFKFB3-205ENST00000379789 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
PFKFB3-205ENST00000379789 CUX2O14529 1486 aa16.83■□□□□ 0.28
PFKFB3-205ENST00000379789 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
PFKFB3-205ENST00000379789 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
PFKFB3-205ENST00000379789 CFTRP13569 1480 aa16.77■□□□□ 0.27
PFKFB3-205ENST00000379789 FBLN2P98095 1184 aa16.75■□□□□ 0.27
PFKFB3-205ENST00000379789 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
PFKFB3-205ENST00000379789 NESP48681 1621 aa16.73■□□□□ 0.27
PFKFB3-205ENST00000379789 FAM50AQ14320 339 aaKnown RBP16.72■□□□□ 0.27
PFKFB3-205ENST00000379789 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
PFKFB3-205ENST00000379789 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
PFKFB3-205ENST00000379789 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
PFKFB3-205ENST00000379789 CUX1P39880 1505 aa16.68■□□□□ 0.26
PFKFB3-205ENST00000379789 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
PFKFB3-205ENST00000379789 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
PFKFB3-205ENST00000379789 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
PFKFB3-205ENST00000379789 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
PFKFB3-205ENST00000379789 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
PFKFB3-205ENST00000379789 IGF1RP08069 1367 aa16.6■□□□□ 0.25
PFKFB3-205ENST00000379789 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
PFKFB3-205ENST00000379789 MYT1Q01538 1121 aa16.52■□□□□ 0.23
PFKFB3-205ENST00000379789 KIF21BO75037 1637 aa16.5■□□□□ 0.23
PFKFB3-205ENST00000379789 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
PFKFB3-205ENST00000379789 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
PFKFB3-205ENST00000379789 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
PFKFB3-205ENST00000379789 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
PFKFB3-205ENST00000379789 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
PFKFB3-205ENST00000379789 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
PFKFB3-205ENST00000379789 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
PFKFB3-205ENST00000379789 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
PFKFB3-205ENST00000379789 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
PFKFB3-205ENST00000379789 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
PFKFB3-205ENST00000379789 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
PFKFB3-205ENST00000379789 MTUS2Q5JR59 1369 aa16.4■□□□□ 0.22
PFKFB3-205ENST00000379789 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms