RNA–Protein interactions for RNA: ENST00000295238.10

CCNT2-202, Transcript of cyclin T2, humanhuman

TSL 1 (best) BASIC

Gene CCNT2, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT2-202ENST00000295238 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
CCNT2-202ENST00000295238 NISCHQ9Y2I1 1504 aa14.7□□□□□ -0.06
CCNT2-202ENST00000295238 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.18
CCNT2-202ENST00000295238 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
CCNT2-202ENST00000295238 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
CCNT2-202ENST00000295238 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
CCNT2-202ENST00000295238 ABCC9O60706 1549 aa13.04□□□□□ -0.32
CCNT2-202ENST00000295238 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
CCNT2-202ENST00000295238 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCNT2-202ENST00000295238 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
CCNT2-202ENST00000295238 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
CCNT2-202ENST00000295238 APLP2Q06481 763 aa12.72□□□□□ -0.37
CCNT2-202ENST00000295238 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
CCNT2-202ENST00000295238 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
CCNT2-202ENST00000295238 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
CCNT2-202ENST00000295238 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
CCNT2-202ENST00000295238 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
CCNT2-202ENST00000295238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
CCNT2-202ENST00000295238 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
CCNT2-202ENST00000295238 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
CCNT2-202ENST00000295238 FBLN2P98095 1184 aa12.24□□□□□ -0.45
CCNT2-202ENST00000295238 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
CCNT2-202ENST00000295238 ITGAEP38570 1179 aa12.23□□□□□ -0.45
CCNT2-202ENST00000295238 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.46
CCNT2-202ENST00000295238 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
CCNT2-202ENST00000295238 ZCCHC6Q5VYS8 1495 aaKnown RBP12.12□□□□□ -0.47
CCNT2-202ENST00000295238 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CCNT2-202ENST00000295238 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
CCNT2-202ENST00000295238 P3H3Q8IVL6 736 aa12.02□□□□□ -0.49
CCNT2-202ENST00000295238 RB1CC1Q8TDY2 1594 aa11.93□□□□□ -0.5
CCNT2-202ENST00000295238 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
CCNT2-202ENST00000295238 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
CCNT2-202ENST00000295238 CNGB1Q14028 1251 aaPredicted RBP11.86□□□□□ -0.51
CCNT2-202ENST00000295238 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
CCNT2-202ENST00000295238 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
CCNT2-202ENST00000295238 NACADO15069 1562 aa11.78□□□□□ -0.52
CCNT2-202ENST00000295238 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
CCNT2-202ENST00000295238 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
CCNT2-202ENST00000295238 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
CCNT2-202ENST00000295238 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
CCNT2-202ENST00000295238 CECR2Q9BXF3 1484 aa11.73□□□□□ -0.53
CCNT2-202ENST00000295238 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
CCNT2-202ENST00000295238 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
CCNT2-202ENST00000295238 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
CCNT2-202ENST00000295238 NEUROD1Q13562 356 aa11.67□□□□□ -0.54
CCNT2-202ENST00000295238 BAZ1BQ9UIG0 1483 aaKnown RBP11.66□□□□□ -0.54
CCNT2-202ENST00000295238 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
CCNT2-202ENST00000295238 ZNF326Q5BKZ1 582 aaKnown RBP11.64□□□□□ -0.55
CCNT2-202ENST00000295238 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCNT2-202ENST00000295238 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
CCNT2-202ENST00000295238 HRCP23327 699 aa11.56□□□□□ -0.56
CCNT2-202ENST00000295238 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
CCNT2-202ENST00000295238 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
CCNT2-202ENST00000295238 BCANQ96GW7 911 aa11.52□□□□□ -0.56
CCNT2-202ENST00000295238 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.56
CCNT2-202ENST00000295238 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
CCNT2-202ENST00000295238 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
CCNT2-202ENST00000295238 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
CCNT2-202ENST00000295238 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
CCNT2-202ENST00000295238 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
CCNT2-202ENST00000295238 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
CCNT2-202ENST00000295238 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
CCNT2-202ENST00000295238 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
CCNT2-202ENST00000295238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■□□□ 11.7
CCNT2-202ENST00000295238 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
CCNT2-202ENST00000295238 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
CCNT2-202ENST00000295238 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
CCNT2-202ENST00000295238 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
CCNT2-202ENST00000295238 CLIP1P30622 1438 aa11.37□□□□□ -0.59
CCNT2-202ENST00000295238 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
CCNT2-202ENST00000295238 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
CCNT2-202ENST00000295238 NEFLP07196 543 aa11.35□□□□□ -0.59
CCNT2-202ENST00000295238 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
CCNT2-202ENST00000295238 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
CCNT2-202ENST00000295238 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
CCNT2-202ENST00000295238 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
CCNT2-202ENST00000295238 TRHP20396 242 aaPredicted RBP11.34□□□□□ -0.59
CCNT2-202ENST00000295238 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
CCNT2-202ENST00000295238 CUX2O14529 1486 aa11.33□□□□□ -0.6
CCNT2-202ENST00000295238 SOGA1O94964 1423 aa11.32□□□□□ -0.6
CCNT2-202ENST00000295238 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
CCNT2-202ENST00000295238 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
CCNT2-202ENST00000295238 WIZO95785 1651 aa11.29□□□□□ -0.6
CCNT2-202ENST00000295238 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
CCNT2-202ENST00000295238 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.6
CCNT2-202ENST00000295238 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
CCNT2-202ENST00000295238 ARID4BQ4LE39 1312 aaPredicted RBP11.27□□□□□ -0.61
CCNT2-202ENST00000295238 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
CCNT2-202ENST00000295238 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.61
CCNT2-202ENST00000295238 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
CCNT2-202ENST00000295238 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
CCNT2-202ENST00000295238 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
CCNT2-202ENST00000295238 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
CCNT2-202ENST00000295238 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
CCNT2-202ENST00000295238 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
CCNT2-202ENST00000295238 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
CCNT2-202ENST00000295238 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.62
CCNT2-202ENST00000295238 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.62
CCNT2-202ENST00000295238 RGL3Q3MIN7 710 aa11.2□□□□□ -0.62
CCNT2-202ENST00000295238 EEA1Q15075 1411 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms