RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
SDHD-201ENST00000375549 AEBP2Q6ZN18 517 aaPredicted RBP27.5■■□□□ 1.99
SDHD-201ENST00000375549 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
SDHD-201ENST00000375549 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
SDHD-201ENST00000375549 ABCC9O60706 1549 aa24.1■■□□□ 1.45
SDHD-201ENST00000375549 ZCCHC6Q5VYS8 1495 aaKnown RBP23.91■■□□□ 1.42
SDHD-201ENST00000375549 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
SDHD-201ENST00000375549 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
SDHD-201ENST00000375549 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
SDHD-201ENST00000375549 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
SDHD-201ENST00000375549 NACADO15069 1562 aa23.46■■□□□ 1.35
SDHD-201ENST00000375549 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
SDHD-201ENST00000375549 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
SDHD-201ENST00000375549 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
SDHD-201ENST00000375549 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
SDHD-201ENST00000375549 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
SDHD-201ENST00000375549 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
SDHD-201ENST00000375549 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
SDHD-201ENST00000375549 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
SDHD-201ENST00000375549 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
SDHD-201ENST00000375549 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
SDHD-201ENST00000375549 FOXD1Q16676 465 aa22.04■■□□□ 1.12
SDHD-201ENST00000375549 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
SDHD-201ENST00000375549 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
SDHD-201ENST00000375549 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
SDHD-201ENST00000375549 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
SDHD-201ENST00000375549 WIZO95785 1651 aa21.84■■□□□ 1.09
SDHD-201ENST00000375549 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
SDHD-201ENST00000375549 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
SDHD-201ENST00000375549 SMARCA2P51531 1590 aa21.77■■□□□ 1.07
SDHD-201ENST00000375549 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
SDHD-201ENST00000375549 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
SDHD-201ENST00000375549 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
SDHD-201ENST00000375549 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
SDHD-201ENST00000375549 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
SDHD-201ENST00000375549 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
SDHD-201ENST00000375549 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
SDHD-201ENST00000375549 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
SDHD-201ENST00000375549 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
SDHD-201ENST00000375549 CFTRP13569 1480 aa21.08■□□□□ 0.96
SDHD-201ENST00000375549 NESP48681 1621 aa21.03■□□□□ 0.96
SDHD-201ENST00000375549 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
SDHD-201ENST00000375549 MSH5O43196 834 aa20.92■□□□□ 0.94
SDHD-201ENST00000375549 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
SDHD-201ENST00000375549 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
SDHD-201ENST00000375549 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
SDHD-201ENST00000375549 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
SDHD-201ENST00000375549 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
SDHD-201ENST00000375549 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
SDHD-201ENST00000375549 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
SDHD-201ENST00000375549 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
SDHD-201ENST00000375549 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
SDHD-201ENST00000375549 CUX1P39880 1505 aa20.65■□□□□ 0.9
SDHD-201ENST00000375549 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
SDHD-201ENST00000375549 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
SDHD-201ENST00000375549 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
SDHD-201ENST00000375549 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
SDHD-201ENST00000375549 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.89
SDHD-201ENST00000375549 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
SDHD-201ENST00000375549 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
SDHD-201ENST00000375549 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
SDHD-201ENST00000375549 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
SDHD-201ENST00000375549 WDR62O43379 1518 aa20.49■□□□□ 0.87
SDHD-201ENST00000375549 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
SDHD-201ENST00000375549 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
SDHD-201ENST00000375549 SOGA1O94964 1423 aa20.41■□□□□ 0.86
SDHD-201ENST00000375549 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
SDHD-201ENST00000375549 FAM9AQ8IZU1 332 aaPredicted RBP20.36■□□□□ 0.85
SDHD-201ENST00000375549 CUX2O14529 1486 aa20.35■□□□□ 0.85
SDHD-201ENST00000375549 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
SDHD-201ENST00000375549 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
SDHD-201ENST00000375549 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
SDHD-201ENST00000375549 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
SDHD-201ENST00000375549 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
SDHD-201ENST00000375549 EEA1Q15075 1411 aa20.25■□□□□ 0.83
SDHD-201ENST00000375549 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
SDHD-201ENST00000375549 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
SDHD-201ENST00000375549 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
SDHD-201ENST00000375549 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
SDHD-201ENST00000375549 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
SDHD-201ENST00000375549 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.827e-7■■□□□ 14.1
SDHD-201ENST00000375549 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
SDHD-201ENST00000375549 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
SDHD-201ENST00000375549 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
SDHD-201ENST00000375549 IGF1RP08069 1367 aa20.12■□□□□ 0.81
SDHD-201ENST00000375549 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
SDHD-201ENST00000375549 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
SDHD-201ENST00000375549 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
SDHD-201ENST00000375549 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
SDHD-201ENST00000375549 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
SDHD-201ENST00000375549 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
SDHD-201ENST00000375549 ADRA2BP18089 450 aa20.03■□□□□ 0.8
SDHD-201ENST00000375549 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
SDHD-201ENST00000375549 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
SDHD-201ENST00000375549 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
SDHD-201ENST00000375549 KIF21BO75037 1637 aa19.97■□□□□ 0.79
SDHD-201ENST00000375549 RAPGEF2Q9Y4G8 1499 aa19.97■□□□□ 0.79
SDHD-201ENST00000375549 CUL7Q14999 1698 aa19.97■□□□□ 0.79
SDHD-201ENST00000375549 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
SDHD-201ENST00000375549 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms