RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
LINC01089-204ENST00000535643 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
LINC01089-204ENST00000535643 ABCC9O60706 1549 aa29.11■■■□□ 2.25
LINC01089-204ENST00000535643 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
LINC01089-204ENST00000535643 CCDC180Q9P1Z9 1646 aa26.96■■□□□ 1.91
LINC01089-204ENST00000535643 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.88
LINC01089-204ENST00000535643 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
LINC01089-204ENST00000535643 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
LINC01089-204ENST00000535643 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
LINC01089-204ENST00000535643 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
LINC01089-204ENST00000535643 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
LINC01089-204ENST00000535643 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
LINC01089-204ENST00000535643 NACADO15069 1562 aa26.03■■□□□ 1.76
LINC01089-204ENST00000535643 CUX2O14529 1486 aa25.88■■□□□ 1.73
LINC01089-204ENST00000535643 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
LINC01089-204ENST00000535643 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
LINC01089-204ENST00000535643 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
LINC01089-204ENST00000535643 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
LINC01089-204ENST00000535643 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
LINC01089-204ENST00000535643 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
LINC01089-204ENST00000535643 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
LINC01089-204ENST00000535643 ILDR1Q86SU0 546 aaPredicted RBP24.6■■□□□ 1.53
LINC01089-204ENST00000535643 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
LINC01089-204ENST00000535643 NESP48681 1621 aa24.43■■□□□ 1.5
LINC01089-204ENST00000535643 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
LINC01089-204ENST00000535643 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
LINC01089-204ENST00000535643 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
LINC01089-204ENST00000535643 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
LINC01089-204ENST00000535643 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.48
LINC01089-204ENST00000535643 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.48
LINC01089-204ENST00000535643 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.48
LINC01089-204ENST00000535643 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
LINC01089-204ENST00000535643 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
LINC01089-204ENST00000535643 ARHGEF11O15085 1522 aa24.01■■□□□ 1.43
LINC01089-204ENST00000535643 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
LINC01089-204ENST00000535643 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.42
LINC01089-204ENST00000535643 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
LINC01089-204ENST00000535643 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
LINC01089-204ENST00000535643 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
LINC01089-204ENST00000535643 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
LINC01089-204ENST00000535643 WDR62O43379 1518 aa23.74■■□□□ 1.39
LINC01089-204ENST00000535643 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
LINC01089-204ENST00000535643 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
LINC01089-204ENST00000535643 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
LINC01089-204ENST00000535643 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
LINC01089-204ENST00000535643 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
LINC01089-204ENST00000535643 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
LINC01089-204ENST00000535643 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
LINC01089-204ENST00000535643 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
LINC01089-204ENST00000535643 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
LINC01089-204ENST00000535643 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
LINC01089-204ENST00000535643 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
LINC01089-204ENST00000535643 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
LINC01089-204ENST00000535643 SOCS7O14512 581 aa23.09■■□□□ 1.29
LINC01089-204ENST00000535643 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
LINC01089-204ENST00000535643 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
LINC01089-204ENST00000535643 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
LINC01089-204ENST00000535643 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
LINC01089-204ENST00000535643 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
LINC01089-204ENST00000535643 ILDR2Q71H61 639 aa22.93■■□□□ 1.26
LINC01089-204ENST00000535643 CHD1O14646 1710 aa22.93■■□□□ 1.26
LINC01089-204ENST00000535643 FBLN2P98095 1184 aa22.84■■□□□ 1.25
LINC01089-204ENST00000535643 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
LINC01089-204ENST00000535643 HECW2Q9P2P5 1572 aa22.83■■□□□ 1.25
LINC01089-204ENST00000535643 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
LINC01089-204ENST00000535643 CLASP1Q7Z460 1538 aa22.68■■□□□ 1.22
LINC01089-204ENST00000535643 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
LINC01089-204ENST00000535643 DISP3Q9P2K9 1392 aa22.61■■□□□ 1.21
LINC01089-204ENST00000535643 CFTRP13569 1480 aa22.6■■□□□ 1.21
LINC01089-204ENST00000535643 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.211e-9■■■■□ 22.4
LINC01089-204ENST00000535643 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
LINC01089-204ENST00000535643 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
LINC01089-204ENST00000535643 ADGRL1O94910 1474 aa22.48■■□□□ 1.19
LINC01089-204ENST00000535643 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
LINC01089-204ENST00000535643 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
LINC01089-204ENST00000535643 KDM6BO15054 1643 aa22.42■■□□□ 1.18
LINC01089-204ENST00000535643 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
LINC01089-204ENST00000535643 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
LINC01089-204ENST00000535643 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
LINC01089-204ENST00000535643 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
LINC01089-204ENST00000535643 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
LINC01089-204ENST00000535643 ABCC10Q5T3U5 1492 aa22.24■■□□□ 1.15
LINC01089-204ENST00000535643 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
LINC01089-204ENST00000535643 SPATA31D1Q6ZQQ2 1576 aa22.13■■□□□ 1.13
LINC01089-204ENST00000535643 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
LINC01089-204ENST00000535643 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
LINC01089-204ENST00000535643 DIP2BQ9P265 1576 aa22.1■■□□□ 1.13
LINC01089-204ENST00000535643 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
LINC01089-204ENST00000535643 WIZO95785 1651 aa22.07■■□□□ 1.12
LINC01089-204ENST00000535643 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
LINC01089-204ENST00000535643 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
LINC01089-204ENST00000535643 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
LINC01089-204ENST00000535643 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
LINC01089-204ENST00000535643 TSPOAP1O95153 1857 aa21.99■■□□□ 1.11
LINC01089-204ENST00000535643 MAPKBP1O60336 1514 aa21.95■■□□□ 1.1
LINC01089-204ENST00000535643 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
LINC01089-204ENST00000535643 CERKQ8TCT0 537 aa21.89■■□□□ 1.09
LINC01089-204ENST00000535643 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
LINC01089-204ENST00000535643 SOGA1O94964 1423 aa21.86■■□□□ 1.09
LINC01089-204ENST00000535643 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms