RNA–Protein interactions for RNA: ENST00000329421.7

MARCKSL1-201, Transcript of MARCKS like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCKSL1, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCKSL1-201ENST00000329421 NISCHQ9Y2I1 1504 aa60.96■■■■■ 7.35
MARCKSL1-201ENST00000329421 CCDC180Q9P1Z9 1646 aa53.7■■■■■ 6.19
MARCKSL1-201ENST00000329421 ABCC9O60706 1549 aa51.82■■■■■ 5.89
MARCKSL1-201ENST00000329421 ZCCHC6Q5VYS8 1495 aaKnown RBP50.96■■■■■ 5.75
MARCKSL1-201ENST00000329421 DCAF8L2P0C7V8 631 aa50.57■■■■■ 5.69
MARCKSL1-201ENST00000329421 DCAF1Q9Y4B6 1507 aa50.44■■■■■ 5.67
MARCKSL1-201ENST00000329421 MYO15BQ96JP2 1530 aa50.33■■■■■ 5.65
MARCKSL1-201ENST00000329421 NACADO15069 1562 aa50.33■■■■■ 5.65
MARCKSL1-201ENST00000329421 RB1CC1Q8TDY2 1594 aa50.14■■■■■ 5.62
MARCKSL1-201ENST00000329421 SCRIBQ14160 1630 aa49.14■■■■■ 5.46
MARCKSL1-201ENST00000329421 UNC13AQ9UPW8 1703 aa49.06■■■■■ 5.44
MARCKSL1-201ENST00000329421 SHROOM4Q9ULL8 1493 aa48.71■■■■■ 5.39
MARCKSL1-201ENST00000329421 BICRAQ9NZM4 1560 aa48.7■■■■■ 5.39
MARCKSL1-201ENST00000329421 PABPN1Q86U42 306 aaKnown RBP eCLIP48.62■■■■■ 5.37
MARCKSL1-201ENST00000329421 CECR2Q9BXF3 1484 aa47.45■■■■■ 5.19
MARCKSL1-201ENST00000329421 EIF4G1Q04637 1599 aaKnown RBP47.31■■■■■ 5.16
MARCKSL1-201ENST00000329421 BAZ1AQ9NRL2 1556 aaPredicted RBP47.13■■■■■ 5.14
MARCKSL1-201ENST00000329421 SMARCA4P51532 1647 aa47.08■■■■■ 5.13
MARCKSL1-201ENST00000329421 MROH2BQ7Z745 1585 aa47.02■■■■■ 5.12
MARCKSL1-201ENST00000329421 DNAJC5BQ9UF47 199 aa46.9■■■■■ 5.1
MARCKSL1-201ENST00000329421 CC2D2AQ9P2K1 1620 aa46.89■■■■■ 5.1
MARCKSL1-201ENST00000329421 RSF1Q96T23 1441 aaPredicted RBP46.82■■■■■ 5.09
MARCKSL1-201ENST00000329421 ATAD2BQ9ULI0 1458 aa46.65■■■■■ 5.06
MARCKSL1-201ENST00000329421 PEG3Q9GZU2 1588 aa46.63■■■■■ 5.05
MARCKSL1-201ENST00000329421 SMARCA2P51531 1590 aa46.56■■■■■ 5.04
MARCKSL1-201ENST00000329421 WIZO95785 1651 aa46.53■■■■■ 5.04
MARCKSL1-201ENST00000329421 NCAPD3P42695 1498 aa46.49■■■■■ 5.03
MARCKSL1-201ENST00000329421 HMGXB3Q12766 1538 aa46.29■■■■■ 5
MARCKSL1-201ENST00000329421 BAZ1BQ9UIG0 1483 aaKnown RBP46.26■■■■■ 5
MARCKSL1-201ENST00000329421 SUPT5HO00267 1087 aaKnown RBP46.26■■■■■ 5
MARCKSL1-201ENST00000329421 TOP2AP11388 1531 aaKnown RBP46.06■■■■■ 4.96
MARCKSL1-201ENST00000329421 CCDC88BA6NC98 1476 aa45.57■■■■■ 4.88
MARCKSL1-201ENST00000329421 CADPSQ9ULU8 1353 aa45.18■■■■■ 4.82
MARCKSL1-201ENST00000329421 NESP48681 1621 aa45.13■■■■■ 4.82
MARCKSL1-201ENST00000329421 CFTRP13569 1480 aa45.1■■■■■ 4.81
MARCKSL1-201ENST00000329421 LAMC3Q9Y6N6 1575 aa45.06■■■■■ 4.8
MARCKSL1-201ENST00000329421 PDS5BQ9NTI5 1447 aa44.73■■■■■ 4.75
MARCKSL1-201ENST00000329421 PRDM2Q13029 1718 aa44.69■■■■■ 4.75
MARCKSL1-201ENST00000329421 FANCD2Q9BXW9 1451 aa44.64■■■■■ 4.74
MARCKSL1-201ENST00000329421 KIF21AQ7Z4S6 1674 aa44.55■■■■■ 4.72
MARCKSL1-201ENST00000329421 ERCC6Q03468 1493 aa44.53■■■■■ 4.72
MARCKSL1-201ENST00000329421 CEP164Q9UPV0 1460 aa44.47■■■■■ 4.71
MARCKSL1-201ENST00000329421 MRC2Q9UBG0 1479 aa44.24■■■■■ 4.67
MARCKSL1-201ENST00000329421 THOC2Q8NI27 1593 aaKnown RBP44.2■■■■■ 4.67
MARCKSL1-201ENST00000329421 URB2Q14146 1524 aaKnown RBP44.17■■■■■ 4.66
MARCKSL1-201ENST00000329421 ABCC8Q09428 1581 aa44.16■■■■■ 4.66
MARCKSL1-201ENST00000329421 WDR62O43379 1518 aa44.07■■■■■ 4.65
MARCKSL1-201ENST00000329421 WRNQ14191 1432 aaPredicted RBP eCLIP44.07■■■■■ 4.64
MARCKSL1-201ENST00000329421 CUX1P39880 1505 aa44.05■■■■■ 4.64
MARCKSL1-201ENST00000329421 TOPBP1Q92547 1522 aa44.03■■■■■ 4.64
MARCKSL1-201ENST00000329421 DNMBPQ6XZF7 1577 aa44.02■■■■■ 4.64
MARCKSL1-201ENST00000329421 SYNJ1O43426 1573 aa43.92■■■■■ 4.62
MARCKSL1-201ENST00000329421 TOP2BQ02880 1626 aa43.86■■■■■ 4.61
MARCKSL1-201ENST00000329421 BIVM-ERCC5R4GMW8 1640 aa43.83■■■■■ 4.61
MARCKSL1-201ENST00000329421 CUX2O14529 1486 aa43.74■■■■■ 4.59
MARCKSL1-201ENST00000329421 POLA1P09884 1462 aaPredicted RBP43.74■■■■■ 4.59
MARCKSL1-201ENST00000329421 FGD5Q6ZNL6 1462 aa43.74■■■■■ 4.59
MARCKSL1-201ENST00000329421 CHIC1Q5VXU3 224 aa43.72■■■■■ 4.59
MARCKSL1-201ENST00000329421 TRIM41Q8WV44 630 aa43.62■■■■■ 4.57
MARCKSL1-201ENST00000329421 SOGA1O94964 1423 aa43.55■■■■■ 4.56
MARCKSL1-201ENST00000329421 RAD54L2Q9Y4B4 1467 aa43.55■■■■■ 4.56
MARCKSL1-201ENST00000329421 IFT140Q96RY7 1462 aa43.51■■■■■ 4.56
MARCKSL1-201ENST00000329421 TARBP1Q13395 1621 aaKnown RBP43.49■■■■■ 4.55
MARCKSL1-201ENST00000329421 ABCA10Q8WWZ4 1543 aa43.36■■■■■ 4.53
MARCKSL1-201ENST00000329421 ZNF608Q9ULD9 1512 aaPredicted RBP43.31■■■■■ 4.52
MARCKSL1-201ENST00000329421 WDR97A6NE52 1622 aa43.3■■■■■ 4.52
MARCKSL1-201ENST00000329421 TDRD9Q8NDG6 1382 aaKnown RBP43.24■■■■■ 4.51
MARCKSL1-201ENST00000329421 AQRO60306 1485 aaKnown RBP eCLIP43.18■■■■■ 4.52e-7■■■■□ 23.9
MARCKSL1-201ENST00000329421 EIF4G3O43432 1585 aaKnown RBP43.11■■■■■ 4.49
MARCKSL1-201ENST00000329421 ABCA5Q8WWZ7 1642 aa43.09■■■■■ 4.49
MARCKSL1-201ENST00000329421 GAPVD1Q14C86 1478 aa43.06■■■■■ 4.48
MARCKSL1-201ENST00000329421 KIF27Q86VH2 1401 aa43.05■■■■■ 4.48
MARCKSL1-201ENST00000329421 RUSC2Q8N2Y8 1516 aa43.03■■■■■ 4.48
MARCKSL1-201ENST00000329421 GRIN2BQ13224 1484 aa42.91■■■■■ 4.46
MARCKSL1-201ENST00000329421 IGF1RP08069 1367 aa42.85■■■■■ 4.45
MARCKSL1-201ENST00000329421 PBRM1Q86U86 1689 aa42.84■■■■■ 4.45
MARCKSL1-201ENST00000329421 ERICH3Q5RHP9 1530 aa42.82■■■■■ 4.45
MARCKSL1-201ENST00000329421 EEA1Q15075 1411 aa42.78■■■■■ 4.44
MARCKSL1-201ENST00000329421 SNAPC4Q5SXM2 1469 aa42.76■■■■■ 4.44
MARCKSL1-201ENST00000329421 FAM9AQ8IZU1 332 aaPredicted RBP42.73■■■■■ 4.43
MARCKSL1-201ENST00000329421 MAGI1Q96QZ7 1491 aaPredicted RBP42.7■■■■■ 4.43
MARCKSL1-201ENST00000329421 CSRNP3Q8WYN3 585 aa42.66■■■■■ 4.42
MARCKSL1-201ENST00000329421 ADAMTS12P58397 1594 aa42.6■■■■■ 4.41
MARCKSL1-201ENST00000329421 FHAD1B1AJZ9 1412 aa42.59■■■■■ 4.41
MARCKSL1-201ENST00000329421 CARMIL1Q5VZK9 1371 aa42.57■■■■■ 4.41
MARCKSL1-201ENST00000329421 CUL7Q14999 1698 aa42.56■■■■■ 4.4
MARCKSL1-201ENST00000329421 SYNJ2O15056 1496 aa42.55■■■■■ 4.4
MARCKSL1-201ENST00000329421 PRXQ9BXM0 1461 aa42.51■■■■■ 4.39
MARCKSL1-201ENST00000329421 CHMP7Q8WUX9 453 aaPredicted RBP42.45■■■■■ 4.39
MARCKSL1-201ENST00000329421 FBLN2P98095 1184 aa42.44■■■■■ 4.38
MARCKSL1-201ENST00000329421 RAPGEF2Q9Y4G8 1499 aa42.39■■■■■ 4.38
MARCKSL1-201ENST00000329421 GRIN2AQ12879 1464 aa42.38■■■■■ 4.37
MARCKSL1-201ENST00000329421 CHD1O14646 1710 aa42.37■■■■■ 4.37
MARCKSL1-201ENST00000329421 KIF21BO75037 1637 aa42.28■■■■■ 4.36
MARCKSL1-201ENST00000329421 NUP160Q12769 1436 aa42.19■■■■■ 4.34
MARCKSL1-201ENST00000329421 CEP170Q5SW79 1584 aa42.15■■■■■ 4.34
MARCKSL1-201ENST00000329421 OSCARQ8IYS5 282 aa42.15■■■■■ 4.34
MARCKSL1-201ENST00000329421 EHMT2Q96KQ7 1210 aa42.11■■■■■ 4.33
MARCKSL1-201ENST00000329421 GOLGA3Q08378 1498 aa42.1■■■■■ 4.33
MARCKSL1-201ENST00000329421 CLASP1Q7Z460 1538 aa41.98■■■■■ 4.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms