RNA–Protein interactions for RNA: ENST00000469235.5

ARF1-202, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-202ENST00000469235 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
ARF1-202ENST00000469235 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
ARF1-202ENST00000469235 ABCC9O60706 1549 aa34.25■■■■□ 3.07
ARF1-202ENST00000469235 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
ARF1-202ENST00000469235 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
ARF1-202ENST00000469235 NACADO15069 1562 aa32.56■■■□□ 2.8
ARF1-202ENST00000469235 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
ARF1-202ENST00000469235 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
ARF1-202ENST00000469235 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
ARF1-202ENST00000469235 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
ARF1-202ENST00000469235 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
ARF1-202ENST00000469235 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
ARF1-202ENST00000469235 BICRAQ9NZM4 1560 aa31.7■■■□□ 2.67
ARF1-202ENST00000469235 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
ARF1-202ENST00000469235 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
ARF1-202ENST00000469235 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
ARF1-202ENST00000469235 CC2D2AQ9P2K1 1620 aa30.92■■■□□ 2.54
ARF1-202ENST00000469235 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
ARF1-202ENST00000469235 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
ARF1-202ENST00000469235 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
ARF1-202ENST00000469235 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
ARF1-202ENST00000469235 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
ARF1-202ENST00000469235 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
ARF1-202ENST00000469235 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
ARF1-202ENST00000469235 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
ARF1-202ENST00000469235 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
ARF1-202ENST00000469235 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
ARF1-202ENST00000469235 ERCC6Q03468 1493 aa29.59■■■□□ 2.33
ARF1-202ENST00000469235 NESP48681 1621 aa29.49■■■□□ 2.31
ARF1-202ENST00000469235 WIZO95785 1651 aa29.43■■■□□ 2.3
ARF1-202ENST00000469235 CUX2O14529 1486 aa29.36■■■□□ 2.29
ARF1-202ENST00000469235 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
ARF1-202ENST00000469235 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
ARF1-202ENST00000469235 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
ARF1-202ENST00000469235 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
ARF1-202ENST00000469235 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
ARF1-202ENST00000469235 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
ARF1-202ENST00000469235 THOC2Q8NI27 1593 aaKnown RBP29.08■■■□□ 2.25
ARF1-202ENST00000469235 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
ARF1-202ENST00000469235 CFTRP13569 1480 aa28.9■■■□□ 2.22
ARF1-202ENST00000469235 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
ARF1-202ENST00000469235 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
ARF1-202ENST00000469235 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
ARF1-202ENST00000469235 WDR62O43379 1518 aa28.78■■■□□ 2.2
ARF1-202ENST00000469235 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
ARF1-202ENST00000469235 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
ARF1-202ENST00000469235 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
ARF1-202ENST00000469235 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
ARF1-202ENST00000469235 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
ARF1-202ENST00000469235 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
ARF1-202ENST00000469235 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
ARF1-202ENST00000469235 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
ARF1-202ENST00000469235 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
ARF1-202ENST00000469235 OSCARQ8IYS5 282 aa28.15■■■□□ 2.1
ARF1-202ENST00000469235 POLA1P09884 1462 aaPredicted RBP28.06■■■□□ 2.08
ARF1-202ENST00000469235 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
ARF1-202ENST00000469235 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
ARF1-202ENST00000469235 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.075e-7■■■■□ 21.3
ARF1-202ENST00000469235 SOGA1O94964 1423 aa27.99■■■□□ 2.07
ARF1-202ENST00000469235 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
ARF1-202ENST00000469235 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
ARF1-202ENST00000469235 CUX1P39880 1505 aa27.95■■■□□ 2.06
ARF1-202ENST00000469235 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
ARF1-202ENST00000469235 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
ARF1-202ENST00000469235 FBLN2P98095 1184 aa27.83■■■□□ 2.05
ARF1-202ENST00000469235 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
ARF1-202ENST00000469235 CHD1O14646 1710 aa27.75■■■□□ 2.03
ARF1-202ENST00000469235 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
ARF1-202ENST00000469235 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
ARF1-202ENST00000469235 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
ARF1-202ENST00000469235 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
ARF1-202ENST00000469235 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
ARF1-202ENST00000469235 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
ARF1-202ENST00000469235 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
ARF1-202ENST00000469235 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.01
ARF1-202ENST00000469235 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.01
ARF1-202ENST00000469235 ABCA10Q8WWZ4 1543 aa27.63■■■□□ 2.01
ARF1-202ENST00000469235 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
ARF1-202ENST00000469235 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
ARF1-202ENST00000469235 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
ARF1-202ENST00000469235 SYNJ1O43426 1573 aa27.56■■■□□ 2
ARF1-202ENST00000469235 PBRM1Q86U86 1689 aa27.55■■■□□ 2
ARF1-202ENST00000469235 SYNJ2O15056 1496 aa27.54■■■□□ 2
ARF1-202ENST00000469235 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
ARF1-202ENST00000469235 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
ARF1-202ENST00000469235 CLASP1Q7Z460 1538 aa27.42■■□□□ 1.98
ARF1-202ENST00000469235 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
ARF1-202ENST00000469235 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
ARF1-202ENST00000469235 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
ARF1-202ENST00000469235 FHAD1B1AJZ9 1412 aa27.3■■□□□ 1.96
ARF1-202ENST00000469235 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
ARF1-202ENST00000469235 NUP160Q12769 1436 aa27.19■■□□□ 1.94
ARF1-202ENST00000469235 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
ARF1-202ENST00000469235 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
ARF1-202ENST00000469235 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
ARF1-202ENST00000469235 IGF1RP08069 1367 aa27.05■■□□□ 1.92
ARF1-202ENST00000469235 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
ARF1-202ENST00000469235 SHROOM2Q13796 1616 aa27■■□□□ 1.91
ARF1-202ENST00000469235 JPH4Q96JJ6 628 aa26.99■■□□□ 1.91
ARF1-202ENST00000469235 CUL7Q14999 1698 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms