RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
CNOT2-239ENST00000552483 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
CNOT2-239ENST00000552483 ABCC9O60706 1549 aa23.05■■□□□ 1.28
CNOT2-239ENST00000552483 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
CNOT2-239ENST00000552483 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
CNOT2-239ENST00000552483 NACADO15069 1562 aa22.12■■□□□ 1.13
CNOT2-239ENST00000552483 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
CNOT2-239ENST00000552483 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
CNOT2-239ENST00000552483 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
CNOT2-239ENST00000552483 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
CNOT2-239ENST00000552483 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
CNOT2-239ENST00000552483 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
CNOT2-239ENST00000552483 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
CNOT2-239ENST00000552483 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
CNOT2-239ENST00000552483 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
CNOT2-239ENST00000552483 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
CNOT2-239ENST00000552483 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
CNOT2-239ENST00000552483 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
CNOT2-239ENST00000552483 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
CNOT2-239ENST00000552483 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
CNOT2-239ENST00000552483 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
CNOT2-239ENST00000552483 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
CNOT2-239ENST00000552483 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
CNOT2-239ENST00000552483 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
CNOT2-239ENST00000552483 PEG3Q9GZU2 1588 aa20.4■□□□□ 0.86
CNOT2-239ENST00000552483 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
CNOT2-239ENST00000552483 WIZO95785 1651 aa20.32■□□□□ 0.84
CNOT2-239ENST00000552483 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
CNOT2-239ENST00000552483 RSF1Q96T23 1441 aaPredicted RBP20.24■□□□□ 0.83
CNOT2-239ENST00000552483 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
CNOT2-239ENST00000552483 NESP48681 1621 aa20■□□□□ 0.79
CNOT2-239ENST00000552483 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
CNOT2-239ENST00000552483 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
CNOT2-239ENST00000552483 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
CNOT2-239ENST00000552483 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
CNOT2-239ENST00000552483 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
CNOT2-239ENST00000552483 CFTRP13569 1480 aa19.73■□□□□ 0.75
CNOT2-239ENST00000552483 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
CNOT2-239ENST00000552483 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
CNOT2-239ENST00000552483 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
CNOT2-239ENST00000552483 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
CNOT2-239ENST00000552483 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
CNOT2-239ENST00000552483 CUX2O14529 1486 aa19.58■□□□□ 0.72
CNOT2-239ENST00000552483 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
CNOT2-239ENST00000552483 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CNOT2-239ENST00000552483 WDR62O43379 1518 aa19.51■□□□□ 0.71
CNOT2-239ENST00000552483 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
CNOT2-239ENST00000552483 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
CNOT2-239ENST00000552483 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
CNOT2-239ENST00000552483 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
CNOT2-239ENST00000552483 CUX1P39880 1505 aa19.23■□□□□ 0.67
CNOT2-239ENST00000552483 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
CNOT2-239ENST00000552483 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
CNOT2-239ENST00000552483 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
CNOT2-239ENST00000552483 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
CNOT2-239ENST00000552483 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
CNOT2-239ENST00000552483 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
CNOT2-239ENST00000552483 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
CNOT2-239ENST00000552483 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
CNOT2-239ENST00000552483 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.65
CNOT2-239ENST00000552483 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
CNOT2-239ENST00000552483 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
CNOT2-239ENST00000552483 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
CNOT2-239ENST00000552483 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CNOT2-239ENST00000552483 SOGA1O94964 1423 aa19.04■□□□□ 0.64
CNOT2-239ENST00000552483 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.63
CNOT2-239ENST00000552483 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
CNOT2-239ENST00000552483 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
CNOT2-239ENST00000552483 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
CNOT2-239ENST00000552483 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
CNOT2-239ENST00000552483 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
CNOT2-239ENST00000552483 CHD1O14646 1710 aa18.86■□□□□ 0.61
CNOT2-239ENST00000552483 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
CNOT2-239ENST00000552483 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
CNOT2-239ENST00000552483 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
CNOT2-239ENST00000552483 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
CNOT2-239ENST00000552483 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
CNOT2-239ENST00000552483 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
CNOT2-239ENST00000552483 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
CNOT2-239ENST00000552483 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CNOT2-239ENST00000552483 FBLN2P98095 1184 aa18.68■□□□□ 0.58
CNOT2-239ENST00000552483 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
CNOT2-239ENST00000552483 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
CNOT2-239ENST00000552483 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
CNOT2-239ENST00000552483 CLASP1Q7Z460 1538 aa18.61■□□□□ 0.57
CNOT2-239ENST00000552483 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
CNOT2-239ENST00000552483 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
CNOT2-239ENST00000552483 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
CNOT2-239ENST00000552483 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
CNOT2-239ENST00000552483 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
CNOT2-239ENST00000552483 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
CNOT2-239ENST00000552483 IGF1RP08069 1367 aa18.56■□□□□ 0.56
CNOT2-239ENST00000552483 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
CNOT2-239ENST00000552483 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
CNOT2-239ENST00000552483 CUL7Q14999 1698 aa18.55■□□□□ 0.56
CNOT2-239ENST00000552483 ARHGEF11O15085 1522 aa18.53■□□□□ 0.56
CNOT2-239ENST00000552483 NUP160Q12769 1436 aa18.52■□□□□ 0.56
CNOT2-239ENST00000552483 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
CNOT2-239ENST00000552483 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
CNOT2-239ENST00000552483 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms