RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 AEBP2Q6ZN18 517 aaPredicted RBP36.23■■■■□ 3.39
SDHD-204ENST00000528021 CHIC1Q5VXU3 224 aa34.12■■■■□ 3.05
SDHD-204ENST00000528021 SENP3Q9H4L4 574 aaPredicted RBP31.12■■■□□ 2.57
SDHD-204ENST00000528021 PHF23Q9BUL5 403 aaPredicted RBP30.58■■■□□ 2.49
SDHD-204ENST00000528021 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
SDHD-204ENST00000528021 FOXD1Q16676 465 aa28.95■■■□□ 2.22
SDHD-204ENST00000528021 MSH5O43196 834 aa27.36■■□□□ 1.97
SDHD-204ENST00000528021 POTEDQ86YR6 584 aa27.27■■□□□ 1.96
SDHD-204ENST00000528021 PLPPR3Q6T4P5 718 aa27.13■■□□□ 1.93
SDHD-204ENST00000528021 PIAS4Q8N2W9 510 aaPredicted RBP27■■□□□ 1.91
SDHD-204ENST00000528021 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
SDHD-204ENST00000528021 ADRA2BP18089 450 aa26.63■■□□□ 1.85
SDHD-204ENST00000528021 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
SDHD-204ENST00000528021 ABCC9O60706 1549 aa25.46■■□□□ 1.67
SDHD-204ENST00000528021 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
SDHD-204ENST00000528021 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
SDHD-204ENST00000528021 MAPK8IP2Q13387 824 aaPredicted RBP24.55■■□□□ 1.52
SDHD-204ENST00000528021 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
SDHD-204ENST00000528021 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
SDHD-204ENST00000528021 NACADO15069 1562 aa24.33■■□□□ 1.49
SDHD-204ENST00000528021 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
SDHD-204ENST00000528021 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
SDHD-204ENST00000528021 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
SDHD-204ENST00000528021 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
SDHD-204ENST00000528021 PPP4R3CPQ6ZMV5 832 aa23.68■■□□□ 1.38
SDHD-204ENST00000528021 CACNB1Q02641 598 aaPredicted RBP23.67■■□□□ 1.38
SDHD-204ENST00000528021 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
SDHD-204ENST00000528021 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
SDHD-204ENST00000528021 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
SDHD-204ENST00000528021 HOXD11P31277 338 aaPredicted RBP23.53■■□□□ 1.36
SDHD-204ENST00000528021 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
SDHD-204ENST00000528021 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
SDHD-204ENST00000528021 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
SDHD-204ENST00000528021 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SDHD-204ENST00000528021 RNF39Q9H2S5 420 aa23.26■■□□□ 1.31
SDHD-204ENST00000528021 RNF216Q9NWF9 866 aaPredicted RBP23.26■■□□□ 1.31
SDHD-204ENST00000528021 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
SDHD-204ENST00000528021 C1QBPQ07021 282 aaKnown RBP22.95■■□□□ 1.26
SDHD-204ENST00000528021 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
SDHD-204ENST00000528021 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
SDHD-204ENST00000528021 NCBP3Q53F19 620 aaKnown RBP22.75■■□□□ 1.23
SDHD-204ENST00000528021 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
SDHD-204ENST00000528021 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
SDHD-204ENST00000528021 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
SDHD-204ENST00000528021 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
SDHD-204ENST00000528021 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
SDHD-204ENST00000528021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.18
SDHD-204ENST00000528021 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
SDHD-204ENST00000528021 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
SDHD-204ENST00000528021 NPM3O75607 178 aaKnown RBP22.3■■□□□ 1.16
SDHD-204ENST00000528021 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
SDHD-204ENST00000528021 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
SDHD-204ENST00000528021 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
SDHD-204ENST00000528021 WIZO95785 1651 aa22.05■■□□□ 1.12
SDHD-204ENST00000528021 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
SDHD-204ENST00000528021 NESP48681 1621 aa21.95■■□□□ 1.1
SDHD-204ENST00000528021 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
SDHD-204ENST00000528021 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SDHD-204ENST00000528021 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
SDHD-204ENST00000528021 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
SDHD-204ENST00000528021 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
SDHD-204ENST00000528021 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
SDHD-204ENST00000528021 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
SDHD-204ENST00000528021 CUX2O14529 1486 aa21.72■■□□□ 1.07
SDHD-204ENST00000528021 CFTRP13569 1480 aa21.71■■□□□ 1.07
SDHD-204ENST00000528021 CAPN15O75808 1086 aa21.67■■□□□ 1.06
SDHD-204ENST00000528021 SPINK5Q9NQ38 1064 aaPredicted RBP21.63■■□□□ 1.05
SDHD-204ENST00000528021 DSG3P32926 999 aa21.62■■□□□ 1.05
SDHD-204ENST00000528021 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
SDHD-204ENST00000528021 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
SDHD-204ENST00000528021 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
SDHD-204ENST00000528021 KCNA4P22459 653 aa21.5■■□□□ 1.03
SDHD-204ENST00000528021 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
SDHD-204ENST00000528021 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
SDHD-204ENST00000528021 WDR62O43379 1518 aa21.4■■□□□ 1.02
SDHD-204ENST00000528021 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
SDHD-204ENST00000528021 APLP2Q06481 763 aa21.38■■□□□ 1.01
SDHD-204ENST00000528021 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
SDHD-204ENST00000528021 POTEHQ6S545 545 aa21.32■■□□□ 1
SDHD-204ENST00000528021 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
SDHD-204ENST00000528021 ABCC8Q09428 1581 aa21.29■■□□□ 1
SDHD-204ENST00000528021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
SDHD-204ENST00000528021 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
SDHD-204ENST00000528021 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
SDHD-204ENST00000528021 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
SDHD-204ENST00000528021 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
SDHD-204ENST00000528021 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
SDHD-204ENST00000528021 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
SDHD-204ENST00000528021 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
SDHD-204ENST00000528021 ABCB7O75027 752 aa21.08■□□□□ 0.97
SDHD-204ENST00000528021 SOGA1O94964 1423 aa21.08■□□□□ 0.97
SDHD-204ENST00000528021 SAMD1Q6SPF0 538 aaPredicted RBP21.07■□□□□ 0.96
SDHD-204ENST00000528021 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
SDHD-204ENST00000528021 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
SDHD-204ENST00000528021 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
SDHD-204ENST00000528021 CUX1P39880 1505 aa20.99■□□□□ 0.95
SDHD-204ENST00000528021 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
SDHD-204ENST00000528021 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SDHD-204ENST00000528021 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
SDHD-204ENST00000528021 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.957e-7■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms