RNA–Protein interactions for RNA: ENST00000530923.5

SDHD-207, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-207ENST00000530923 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
SDHD-207ENST00000530923 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
SDHD-207ENST00000530923 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
SDHD-207ENST00000530923 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
SDHD-207ENST00000530923 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SDHD-207ENST00000530923 ABCC9O60706 1549 aa17.07■□□□□ 0.32
SDHD-207ENST00000530923 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SDHD-207ENST00000530923 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
SDHD-207ENST00000530923 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
SDHD-207ENST00000530923 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
SDHD-207ENST00000530923 FOXD1Q16676 465 aa16.11■□□□□ 0.17
SDHD-207ENST00000530923 NACADO15069 1562 aa16■□□□□ 0.15
SDHD-207ENST00000530923 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
SDHD-207ENST00000530923 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
SDHD-207ENST00000530923 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
SDHD-207ENST00000530923 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
SDHD-207ENST00000530923 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
SDHD-207ENST00000530923 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
SDHD-207ENST00000530923 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
SDHD-207ENST00000530923 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
SDHD-207ENST00000530923 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
SDHD-207ENST00000530923 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
SDHD-207ENST00000530923 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
SDHD-207ENST00000530923 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
SDHD-207ENST00000530923 MSH5O43196 834 aa15.34■□□□□ 0.05
SDHD-207ENST00000530923 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.05
SDHD-207ENST00000530923 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
SDHD-207ENST00000530923 ADRA2BP18089 450 aa15.12■□□□□ 0.01
SDHD-207ENST00000530923 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
SDHD-207ENST00000530923 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
SDHD-207ENST00000530923 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
SDHD-207ENST00000530923 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SDHD-207ENST00000530923 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
SDHD-207ENST00000530923 NESP48681 1621 aa14.68□□□□□ -0.06
SDHD-207ENST00000530923 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
SDHD-207ENST00000530923 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
SDHD-207ENST00000530923 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
SDHD-207ENST00000530923 CUX2O14529 1486 aa14.65□□□□□ -0.06
SDHD-207ENST00000530923 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
SDHD-207ENST00000530923 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
SDHD-207ENST00000530923 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
SDHD-207ENST00000530923 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
SDHD-207ENST00000530923 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
SDHD-207ENST00000530923 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
SDHD-207ENST00000530923 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
SDHD-207ENST00000530923 WIZO95785 1651 aa14.4□□□□□ -0.1
SDHD-207ENST00000530923 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
SDHD-207ENST00000530923 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
SDHD-207ENST00000530923 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.12
SDHD-207ENST00000530923 WDR62O43379 1518 aa14.25□□□□□ -0.13
SDHD-207ENST00000530923 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
SDHD-207ENST00000530923 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
SDHD-207ENST00000530923 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
SDHD-207ENST00000530923 CFTRP13569 1480 aa14.18□□□□□ -0.14
SDHD-207ENST00000530923 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
SDHD-207ENST00000530923 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
SDHD-207ENST00000530923 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
SDHD-207ENST00000530923 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
SDHD-207ENST00000530923 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
SDHD-207ENST00000530923 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
SDHD-207ENST00000530923 PRDM2Q13029 1718 aa14□□□□□ -0.17
SDHD-207ENST00000530923 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
SDHD-207ENST00000530923 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
SDHD-207ENST00000530923 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
SDHD-207ENST00000530923 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
SDHD-207ENST00000530923 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
SDHD-207ENST00000530923 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
SDHD-207ENST00000530923 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
SDHD-207ENST00000530923 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
SDHD-207ENST00000530923 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.197e-7■■□□□ 14.1
SDHD-207ENST00000530923 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
SDHD-207ENST00000530923 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
SDHD-207ENST00000530923 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
SDHD-207ENST00000530923 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
SDHD-207ENST00000530923 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
SDHD-207ENST00000530923 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
SDHD-207ENST00000530923 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
SDHD-207ENST00000530923 CHD1O14646 1710 aa13.77□□□□□ -0.21
SDHD-207ENST00000530923 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
SDHD-207ENST00000530923 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
SDHD-207ENST00000530923 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
SDHD-207ENST00000530923 FBLN2P98095 1184 aa13.74□□□□□ -0.21
SDHD-207ENST00000530923 SOGA1O94964 1423 aa13.73□□□□□ -0.21
SDHD-207ENST00000530923 CUX1P39880 1505 aa13.69□□□□□ -0.22
SDHD-207ENST00000530923 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
SDHD-207ENST00000530923 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
SDHD-207ENST00000530923 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
SDHD-207ENST00000530923 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
SDHD-207ENST00000530923 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
SDHD-207ENST00000530923 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
SDHD-207ENST00000530923 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
SDHD-207ENST00000530923 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
SDHD-207ENST00000530923 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
SDHD-207ENST00000530923 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
SDHD-207ENST00000530923 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
SDHD-207ENST00000530923 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
SDHD-207ENST00000530923 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
SDHD-207ENST00000530923 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
SDHD-207ENST00000530923 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
SDHD-207ENST00000530923 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms