RNA–Protein interactions for RNA: ENST00000446940.5

PUM2-211, Transcript of pumilio RNA binding family member 2, humanhuman

TSL 4

Gene PUM2, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM2-211ENST00000446940 NISCHQ9Y2I1 1504 aa35.81■■■■□ 3.32
PUM2-211ENST00000446940 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.68
PUM2-211ENST00000446940 ABCC9O60706 1549 aa31.36■■■□□ 2.61
PUM2-211ENST00000446940 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
PUM2-211ENST00000446940 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
PUM2-211ENST00000446940 NACADO15069 1562 aa29.97■■■□□ 2.39
PUM2-211ENST00000446940 ZCCHC6Q5VYS8 1495 aaKnown RBP29.79■■■□□ 2.36
PUM2-211ENST00000446940 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
PUM2-211ENST00000446940 DCAF1Q9Y4B6 1507 aa29.56■■■□□ 2.32
PUM2-211ENST00000446940 UNC13AQ9UPW8 1703 aa29.38■■■□□ 2.29
PUM2-211ENST00000446940 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
PUM2-211ENST00000446940 BICRAQ9NZM4 1560 aa29.19■■■□□ 2.26
PUM2-211ENST00000446940 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
PUM2-211ENST00000446940 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
PUM2-211ENST00000446940 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
PUM2-211ENST00000446940 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
PUM2-211ENST00000446940 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
PUM2-211ENST00000446940 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
PUM2-211ENST00000446940 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
PUM2-211ENST00000446940 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
PUM2-211ENST00000446940 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
PUM2-211ENST00000446940 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
PUM2-211ENST00000446940 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
PUM2-211ENST00000446940 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
PUM2-211ENST00000446940 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
PUM2-211ENST00000446940 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
PUM2-211ENST00000446940 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
PUM2-211ENST00000446940 WIZO95785 1651 aa27.32■■□□□ 1.96
PUM2-211ENST00000446940 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
PUM2-211ENST00000446940 NESP48681 1621 aa27.12■■□□□ 1.93
PUM2-211ENST00000446940 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
PUM2-211ENST00000446940 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
PUM2-211ENST00000446940 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
PUM2-211ENST00000446940 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
PUM2-211ENST00000446940 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
PUM2-211ENST00000446940 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
PUM2-211ENST00000446940 CUX2O14529 1486 aa26.72■■□□□ 1.87
PUM2-211ENST00000446940 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
PUM2-211ENST00000446940 CFTRP13569 1480 aa26.69■■□□□ 1.86
PUM2-211ENST00000446940 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
PUM2-211ENST00000446940 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
PUM2-211ENST00000446940 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
PUM2-211ENST00000446940 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
PUM2-211ENST00000446940 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
PUM2-211ENST00000446940 WDR62O43379 1518 aa26.43■■□□□ 1.82
PUM2-211ENST00000446940 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
PUM2-211ENST00000446940 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
PUM2-211ENST00000446940 TOPBP1Q92547 1522 aa26.14■■□□□ 1.77
PUM2-211ENST00000446940 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
PUM2-211ENST00000446940 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
PUM2-211ENST00000446940 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
PUM2-211ENST00000446940 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
PUM2-211ENST00000446940 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
PUM2-211ENST00000446940 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PUM2-211ENST00000446940 CUX1P39880 1505 aa25.91■■□□□ 1.74
PUM2-211ENST00000446940 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
PUM2-211ENST00000446940 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
PUM2-211ENST00000446940 RAD54L2Q9Y4B4 1467 aa25.84■■□□□ 1.73
PUM2-211ENST00000446940 SOGA1O94964 1423 aa25.81■■□□□ 1.72
PUM2-211ENST00000446940 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.72
PUM2-211ENST00000446940 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
PUM2-211ENST00000446940 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
PUM2-211ENST00000446940 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.75e-6■■■■■ 29.2
PUM2-211ENST00000446940 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
PUM2-211ENST00000446940 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
PUM2-211ENST00000446940 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
PUM2-211ENST00000446940 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
PUM2-211ENST00000446940 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
PUM2-211ENST00000446940 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
PUM2-211ENST00000446940 FBLN2P98095 1184 aa25.5■■□□□ 1.67
PUM2-211ENST00000446940 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
PUM2-211ENST00000446940 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
PUM2-211ENST00000446940 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
PUM2-211ENST00000446940 CHD1O14646 1710 aa25.48■■□□□ 1.67
PUM2-211ENST00000446940 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
PUM2-211ENST00000446940 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
PUM2-211ENST00000446940 MAGI1Q96QZ7 1491 aaPredicted RBP25.41■■□□□ 1.66
PUM2-211ENST00000446940 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
PUM2-211ENST00000446940 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
PUM2-211ENST00000446940 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
PUM2-211ENST00000446940 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
PUM2-211ENST00000446940 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
PUM2-211ENST00000446940 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
PUM2-211ENST00000446940 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
PUM2-211ENST00000446940 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
PUM2-211ENST00000446940 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
PUM2-211ENST00000446940 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
PUM2-211ENST00000446940 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PUM2-211ENST00000446940 GRIN2AQ12879 1464 aa25.17■■□□□ 1.62
PUM2-211ENST00000446940 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
PUM2-211ENST00000446940 IGF1RP08069 1367 aa25.1■■□□□ 1.61
PUM2-211ENST00000446940 CEP170Q5SW79 1584 aa25.07■■□□□ 1.6
PUM2-211ENST00000446940 NUP160Q12769 1436 aa25.07■■□□□ 1.6
PUM2-211ENST00000446940 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
PUM2-211ENST00000446940 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
PUM2-211ENST00000446940 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
PUM2-211ENST00000446940 CUL7Q14999 1698 aa24.95■■□□□ 1.58
PUM2-211ENST00000446940 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
PUM2-211ENST00000446940 ERCC6L2Q5T890 1561 aa24.91■■□□□ 1.58
PUM2-211ENST00000446940 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms