RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
CD46-217ENST00000493796 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
CD46-217ENST00000493796 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
CD46-217ENST00000493796 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CD46-217ENST00000493796 FOXD1Q16676 465 aa17.34■□□□□ 0.37
CD46-217ENST00000493796 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
CD46-217ENST00000493796 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
CD46-217ENST00000493796 ADRA2BP18089 450 aa16.57■□□□□ 0.24
CD46-217ENST00000493796 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
CD46-217ENST00000493796 MSH5O43196 834 aa16.03■□□□□ 0.16
CD46-217ENST00000493796 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
CD46-217ENST00000493796 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
CD46-217ENST00000493796 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
CD46-217ENST00000493796 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
CD46-217ENST00000493796 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
CD46-217ENST00000493796 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CD46-217ENST00000493796 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
CD46-217ENST00000493796 KCNA4P22459 653 aa14.77□□□□□ -0.05
CD46-217ENST00000493796 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
CD46-217ENST00000493796 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
CD46-217ENST00000493796 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
CD46-217ENST00000493796 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
CD46-217ENST00000493796 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
CD46-217ENST00000493796 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
CD46-217ENST00000493796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
CD46-217ENST00000493796 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
CD46-217ENST00000493796 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
CD46-217ENST00000493796 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
CD46-217ENST00000493796 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
CD46-217ENST00000493796 ZBTB22O15209 634 aa13.59□□□□□ -0.23
CD46-217ENST00000493796 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
CD46-217ENST00000493796 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
CD46-217ENST00000493796 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
CD46-217ENST00000493796 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
CD46-217ENST00000493796 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
CD46-217ENST00000493796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
CD46-217ENST00000493796 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
CD46-217ENST00000493796 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CD46-217ENST00000493796 APLP2Q06481 763 aa13.29□□□□□ -0.28
CD46-217ENST00000493796 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
CD46-217ENST00000493796 CAPN15O75808 1086 aa13.2□□□□□ -0.3
CD46-217ENST00000493796 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CD46-217ENST00000493796 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
CD46-217ENST00000493796 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
CD46-217ENST00000493796 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
CD46-217ENST00000493796 DSG3P32926 999 aa13.02□□□□□ -0.33
CD46-217ENST00000493796 ABCB7O75027 752 aa12.95□□□□□ -0.34
CD46-217ENST00000493796 POLA2Q14181 598 aa12.89□□□□□ -0.35
CD46-217ENST00000493796 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
CD46-217ENST00000493796 FBLN2P98095 1184 aa12.58□□□□□ -0.4
CD46-217ENST00000493796 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
CD46-217ENST00000493796 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
CD46-217ENST00000493796 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
CD46-217ENST00000493796 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
CD46-217ENST00000493796 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
CD46-217ENST00000493796 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
CD46-217ENST00000493796 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
CD46-217ENST00000493796 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CD46-217ENST00000493796 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
CD46-217ENST00000493796 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
CD46-217ENST00000493796 FKBP8Q14318 412 aa12.13□□□□□ -0.47
CD46-217ENST00000493796 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
CD46-217ENST00000493796 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
CD46-217ENST00000493796 PROM2Q8N271 834 aa12.03□□□□□ -0.48
CD46-217ENST00000493796 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
CD46-217ENST00000493796 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
CD46-217ENST00000493796 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
CD46-217ENST00000493796 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
CD46-217ENST00000493796 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
CD46-217ENST00000493796 POTEHQ6S545 545 aa11.84□□□□□ -0.51
CD46-217ENST00000493796 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
CD46-217ENST00000493796 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
CD46-217ENST00000493796 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
CD46-217ENST00000493796 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
CD46-217ENST00000493796 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
CD46-217ENST00000493796 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
CD46-217ENST00000493796 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
CD46-217ENST00000493796 MIER1Q8N108 512 aa11.59□□□□□ -0.55
CD46-217ENST00000493796 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
CD46-217ENST00000493796 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
CD46-217ENST00000493796 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
CD46-217ENST00000493796 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
CD46-217ENST00000493796 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
CD46-217ENST00000493796 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
CD46-217ENST00000493796 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
CD46-217ENST00000493796 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CD46-217ENST00000493796 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
CD46-217ENST00000493796 HAX1O00165 279 aa11.39□□□□□ -0.59
CD46-217ENST00000493796 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
CD46-217ENST00000493796 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
CD46-217ENST00000493796 NUBP1P53384 320 aa11.32□□□□□ -0.6
CD46-217ENST00000493796 EVX2Q03828 476 aa11.31□□□□□ -0.6
CD46-217ENST00000493796 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
CD46-217ENST00000493796 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
CD46-217ENST00000493796 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
CD46-217ENST00000493796 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
CD46-217ENST00000493796 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
CD46-217ENST00000493796 FAM212AQ96EL1 285 aa11.23□□□□□ -0.61
CD46-217ENST00000493796 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
CD46-217ENST00000493796 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms