RNA–Protein interactions for RNA: ENST00000552915.5

CNOT2-241, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-241ENST00000552915 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
CNOT2-241ENST00000552915 CHIC1Q5VXU3 224 aa34.32■■■■□ 3.08
CNOT2-241ENST00000552915 PHF23Q9BUL5 403 aaPredicted RBP30.25■■■□□ 2.43
CNOT2-241ENST00000552915 SENP3Q9H4L4 574 aaPredicted RBP29.79■■■□□ 2.36
CNOT2-241ENST00000552915 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
CNOT2-241ENST00000552915 PLPPR3Q6T4P5 718 aa27.78■■■□□ 2.04
CNOT2-241ENST00000552915 FOXD1Q16676 465 aa27.76■■■□□ 2.03
CNOT2-241ENST00000552915 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
CNOT2-241ENST00000552915 ADRA2BP18089 450 aa26.66■■□□□ 1.86
CNOT2-241ENST00000552915 PIAS4Q8N2W9 510 aaPredicted RBP26.12■■□□□ 1.77
CNOT2-241ENST00000552915 MSH5O43196 834 aa25.5■■□□□ 1.67
CNOT2-241ENST00000552915 CCDC180Q9P1Z9 1646 aa24.88■■□□□ 1.57
CNOT2-241ENST00000552915 PPP4R3CPQ6ZMV5 832 aa24.53■■□□□ 1.52
CNOT2-241ENST00000552915 MAPK8IP2Q13387 824 aaPredicted RBP24.23■■□□□ 1.47
CNOT2-241ENST00000552915 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
CNOT2-241ENST00000552915 KCNA4P22459 653 aa23.95■■□□□ 1.42
CNOT2-241ENST00000552915 ABCC9O60706 1549 aa23.84■■□□□ 1.41
CNOT2-241ENST00000552915 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
CNOT2-241ENST00000552915 CNKSR2Q8WXI2 1034 aa23.8■■□□□ 1.4
CNOT2-241ENST00000552915 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
CNOT2-241ENST00000552915 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
CNOT2-241ENST00000552915 NPM3O75607 178 aaKnown RBP23.55■■□□□ 1.36
CNOT2-241ENST00000552915 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
CNOT2-241ENST00000552915 POTEDQ86YR6 584 aa23.42■■□□□ 1.34
CNOT2-241ENST00000552915 RNF216Q9NWF9 866 aaPredicted RBP23.36■■□□□ 1.33
CNOT2-241ENST00000552915 HOXD11P31277 338 aaPredicted RBP23.31■■□□□ 1.32
CNOT2-241ENST00000552915 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
CNOT2-241ENST00000552915 NACADO15069 1562 aa23.18■■□□□ 1.3
CNOT2-241ENST00000552915 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
CNOT2-241ENST00000552915 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
CNOT2-241ENST00000552915 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
CNOT2-241ENST00000552915 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
CNOT2-241ENST00000552915 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
CNOT2-241ENST00000552915 DCAF8L1A6NGE4 600 aa22.77■■□□□ 1.24
CNOT2-241ENST00000552915 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
CNOT2-241ENST00000552915 SLC4A1APQ9BWU0 796 aaKnown RBP22.73■■□□□ 1.23
CNOT2-241ENST00000552915 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
CNOT2-241ENST00000552915 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
CNOT2-241ENST00000552915 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
CNOT2-241ENST00000552915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.143e-7■■■□□ 18.6
CNOT2-241ENST00000552915 ZBTB22O15209 634 aa22.1■■□□□ 1.13
CNOT2-241ENST00000552915 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
CNOT2-241ENST00000552915 FOXD4L1Q9NU39 408 aa21.99■■□□□ 1.11
CNOT2-241ENST00000552915 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
CNOT2-241ENST00000552915 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
CNOT2-241ENST00000552915 U3KPZ7 1027 aaPredicted RBP21.89■■□□□ 1.09
CNOT2-241ENST00000552915 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
CNOT2-241ENST00000552915 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
CNOT2-241ENST00000552915 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
CNOT2-241ENST00000552915 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
CNOT2-241ENST00000552915 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
CNOT2-241ENST00000552915 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
CNOT2-241ENST00000552915 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
CNOT2-241ENST00000552915 MYCNP04198 464 aaPredicted RBP21.69■■□□□ 1.06
CNOT2-241ENST00000552915 WIZO95785 1651 aa21.68■■□□□ 1.06
CNOT2-241ENST00000552915 C1QBPQ07021 282 aaKnown RBP21.59■■□□□ 1.05
CNOT2-241ENST00000552915 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
CNOT2-241ENST00000552915 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
CNOT2-241ENST00000552915 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CNOT2-241ENST00000552915 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
CNOT2-241ENST00000552915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
CNOT2-241ENST00000552915 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
CNOT2-241ENST00000552915 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
CNOT2-241ENST00000552915 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
CNOT2-241ENST00000552915 SAMD1Q6SPF0 538 aaPredicted RBP21.39■■□□□ 1.01
CNOT2-241ENST00000552915 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
CNOT2-241ENST00000552915 CACNB1Q02641 598 aaPredicted RBP21.35■■□□□ 1.01
CNOT2-241ENST00000552915 SPINK5Q9NQ38 1064 aaPredicted RBP21.32■■□□□ 1
CNOT2-241ENST00000552915 NCAPD3P42695 1498 aa21.32■■□□□ 1
CNOT2-241ENST00000552915 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
CNOT2-241ENST00000552915 APLP2Q06481 763 aa21.18■□□□□ 0.98
CNOT2-241ENST00000552915 ATXN8OSP0DMR3 200 aa21.16■□□□□ 0.98
CNOT2-241ENST00000552915 CAPN15O75808 1086 aa21.15■□□□□ 0.98
CNOT2-241ENST00000552915 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
CNOT2-241ENST00000552915 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
CNOT2-241ENST00000552915 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
CNOT2-241ENST00000552915 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
CNOT2-241ENST00000552915 DSG3P32926 999 aa20.85■□□□□ 0.93
CNOT2-241ENST00000552915 ABCB7O75027 752 aa20.82■□□□□ 0.92
CNOT2-241ENST00000552915 NESP48681 1621 aa20.79■□□□□ 0.92
CNOT2-241ENST00000552915 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
CNOT2-241ENST00000552915 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
CNOT2-241ENST00000552915 CFTRP13569 1480 aa20.76■□□□□ 0.91
CNOT2-241ENST00000552915 POLA2Q14181 598 aa20.71■□□□□ 0.91
CNOT2-241ENST00000552915 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
CNOT2-241ENST00000552915 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.9
CNOT2-241ENST00000552915 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
CNOT2-241ENST00000552915 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
CNOT2-241ENST00000552915 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
CNOT2-241ENST00000552915 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
CNOT2-241ENST00000552915 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
CNOT2-241ENST00000552915 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
CNOT2-241ENST00000552915 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CNOT2-241ENST00000552915 BIVM-ERCC5R4GMW8 1640 aa20.43■□□□□ 0.86
CNOT2-241ENST00000552915 CUX1P39880 1505 aa20.43■□□□□ 0.86
CNOT2-241ENST00000552915 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
CNOT2-241ENST00000552915 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
CNOT2-241ENST00000552915 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
CNOT2-241ENST00000552915 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
CNOT2-241ENST00000552915 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms