RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
CD46-209ENST00000367047 HRCP23327 699 aa14.4□□□□□ -0.1
CD46-209ENST00000367047 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
CD46-209ENST00000367047 NISCHQ9Y2I1 1504 aa14.19□□□□□ -0.14
CD46-209ENST00000367047 MYT1Q01538 1121 aa14.09□□□□□ -0.15
CD46-209ENST00000367047 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
CD46-209ENST00000367047 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
CD46-209ENST00000367047 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
CD46-209ENST00000367047 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
CD46-209ENST00000367047 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
CD46-209ENST00000367047 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
CD46-209ENST00000367047 GTF3C3Q9Y5Q9 886 aa13.4□□□□□ -0.26
CD46-209ENST00000367047 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
CD46-209ENST00000367047 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
CD46-209ENST00000367047 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
CD46-209ENST00000367047 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
CD46-209ENST00000367047 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
CD46-209ENST00000367047 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
CD46-209ENST00000367047 CENPBP07199 599 aaPredicted RBP13.2□□□□□ -0.3
CD46-209ENST00000367047 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
CD46-209ENST00000367047 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
CD46-209ENST00000367047 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
CD46-209ENST00000367047 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
CD46-209ENST00000367047 CCDC180Q9P1Z9 1646 aa13.03□□□□□ -0.32
CD46-209ENST00000367047 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
CD46-209ENST00000367047 YTHDC1Q96MU7 727 aaKnown RBP12.93□□□□□ -0.34
CD46-209ENST00000367047 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
CD46-209ENST00000367047 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
CD46-209ENST00000367047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CD46-209ENST00000367047 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
CD46-209ENST00000367047 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
CD46-209ENST00000367047 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
CD46-209ENST00000367047 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
CD46-209ENST00000367047 MIER1Q8N108 512 aa12.6□□□□□ -0.39
CD46-209ENST00000367047 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
CD46-209ENST00000367047 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.4
CD46-209ENST00000367047 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
CD46-209ENST00000367047 APLP2Q06481 763 aa12.53□□□□□ -0.4
CD46-209ENST00000367047 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
CD46-209ENST00000367047 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
CD46-209ENST00000367047 BCANQ96GW7 911 aa12.38□□□□□ -0.43
CD46-209ENST00000367047 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
CD46-209ENST00000367047 MSH5O43196 834 aa12.26□□□□□ -0.45
CD46-209ENST00000367047 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
CD46-209ENST00000367047 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
CD46-209ENST00000367047 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
CD46-209ENST00000367047 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.45
CD46-209ENST00000367047 FKBP8Q14318 412 aa12.21□□□□□ -0.45
CD46-209ENST00000367047 ITGAEP38570 1179 aa12.17□□□□□ -0.46
CD46-209ENST00000367047 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
CD46-209ENST00000367047 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
CD46-209ENST00000367047 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
CD46-209ENST00000367047 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
CD46-209ENST00000367047 NEFLP07196 543 aa12.07□□□□□ -0.48
CD46-209ENST00000367047 KCNH8Q96L42 1107 aa12.05□□□□□ -0.48
CD46-209ENST00000367047 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
CD46-209ENST00000367047 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
CD46-209ENST00000367047 FANCIQ9NVI1 1328 aa12.03□□□□□ -0.48
CD46-209ENST00000367047 NBR1Q14596 966 aa12.02□□□□□ -0.49
CD46-209ENST00000367047 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
CD46-209ENST00000367047 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
CD46-209ENST00000367047 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
CD46-209ENST00000367047 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
CD46-209ENST00000367047 TRIM52Q96A61 297 aa11.88□□□□□ -0.51
CD46-209ENST00000367047 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
CD46-209ENST00000367047 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
CD46-209ENST00000367047 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
CD46-209ENST00000367047 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
CD46-209ENST00000367047 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
CD46-209ENST00000367047 WRNQ14191 1432 aaPredicted RBP eCLIP11.8□□□□□ -0.52
CD46-209ENST00000367047 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
CD46-209ENST00000367047 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
CD46-209ENST00000367047 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
CD46-209ENST00000367047 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
CD46-209ENST00000367047 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
CD46-209ENST00000367047 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
CD46-209ENST00000367047 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
CD46-209ENST00000367047 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
CD46-209ENST00000367047 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
CD46-209ENST00000367047 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
CD46-209ENST00000367047 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
CD46-209ENST00000367047 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
CD46-209ENST00000367047 DHX57Q6P158 1386 aaKnown RBP11.64□□□□□ -0.55
CD46-209ENST00000367047 PPP4R2Q9NY27 417 aa11.63□□□□□ -0.55
CD46-209ENST00000367047 ANP32AP39687 249 aaKnown RBP11.63□□□□□ -0.55
CD46-209ENST00000367047 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
CD46-209ENST00000367047 ANP32CO43423 234 aa11.61□□□□□ -0.55
CD46-209ENST00000367047 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
CD46-209ENST00000367047 NEFMP07197 916 aa11.59□□□□□ -0.55
CD46-209ENST00000367047 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
CD46-209ENST00000367047 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
CD46-209ENST00000367047 ABCC9O60706 1549 aa11.59□□□□□ -0.55
CD46-209ENST00000367047 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
CD46-209ENST00000367047 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.56
CD46-209ENST00000367047 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
CD46-209ENST00000367047 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
CD46-209ENST00000367047 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
CD46-209ENST00000367047 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
CD46-209ENST00000367047 GLIPR1L2Q4G1C9 344 aa11.56□□□□□ -0.56
CD46-209ENST00000367047 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms