RNA–Protein interactions for RNA: ENST00000419781.5

CCNT2-204, Transcript of cyclin T2, humanhuman

TSL 1 (best)

Gene CCNT2, Length 5,414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT2-204ENST00000419781 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
CCNT2-204ENST00000419781 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
CCNT2-204ENST00000419781 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
CCNT2-204ENST00000419781 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
CCNT2-204ENST00000419781 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
CCNT2-204ENST00000419781 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
CCNT2-204ENST00000419781 APLP2Q06481 763 aa24.05■■□□□ 1.44
CCNT2-204ENST00000419781 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
CCNT2-204ENST00000419781 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
CCNT2-204ENST00000419781 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
CCNT2-204ENST00000419781 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
CCNT2-204ENST00000419781 ERICH6Q7L0X2 663 aa22.94■■□□□ 1.26
CCNT2-204ENST00000419781 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
CCNT2-204ENST00000419781 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
CCNT2-204ENST00000419781 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
CCNT2-204ENST00000419781 ABCC9O60706 1549 aa22.77■■□□□ 1.24
CCNT2-204ENST00000419781 CENPBP07199 599 aaPredicted RBP22.77■■□□□ 1.24
CCNT2-204ENST00000419781 ZEB1P37275 1124 aaPredicted RBP22.73■■□□□ 1.23
CCNT2-204ENST00000419781 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
CCNT2-204ENST00000419781 NEFLP07196 543 aa22.59■■□□□ 1.21
CCNT2-204ENST00000419781 MYT1Q01538 1121 aa22.58■■□□□ 1.2
CCNT2-204ENST00000419781 MYT1LQ9UL68 1186 aa22.56■■□□□ 1.2
CCNT2-204ENST00000419781 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
CCNT2-204ENST00000419781 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
CCNT2-204ENST00000419781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
CCNT2-204ENST00000419781 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
CCNT2-204ENST00000419781 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
CCNT2-204ENST00000419781 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
CCNT2-204ENST00000419781 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
CCNT2-204ENST00000419781 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
CCNT2-204ENST00000419781 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
CCNT2-204ENST00000419781 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
CCNT2-204ENST00000419781 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
CCNT2-204ENST00000419781 ITGAEP38570 1179 aa21.92■■□□□ 1.1
CCNT2-204ENST00000419781 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
CCNT2-204ENST00000419781 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
CCNT2-204ENST00000419781 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
CCNT2-204ENST00000419781 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
CCNT2-204ENST00000419781 NACADO15069 1562 aa21.63■■□□□ 1.05
CCNT2-204ENST00000419781 CLSPNQ9HAW4 1339 aa21.6■■□□□ 1.05
CCNT2-204ENST00000419781 CNGB1Q14028 1251 aaPredicted RBP21.58■■□□□ 1.05
CCNT2-204ENST00000419781 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
CCNT2-204ENST00000419781 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
CCNT2-204ENST00000419781 ZBTB47Q9UFB7 747 aaPredicted RBP21.48■■□□□ 1.03
CCNT2-204ENST00000419781 TRIM52Q96A61 297 aa21.47■■□□□ 1.03
CCNT2-204ENST00000419781 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
CCNT2-204ENST00000419781 HRCP23327 699 aa21.36■■□□□ 1.01
CCNT2-204ENST00000419781 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
CCNT2-204ENST00000419781 NEFMP07197 916 aa21.34■■□□□ 1.01
CCNT2-204ENST00000419781 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1
CCNT2-204ENST00000419781 FBLN2P98095 1184 aa21.32■■□□□ 1
CCNT2-204ENST00000419781 BCANQ96GW7 911 aa21.31■■□□□ 1
CCNT2-204ENST00000419781 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
CCNT2-204ENST00000419781 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
CCNT2-204ENST00000419781 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
CCNT2-204ENST00000419781 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
CCNT2-204ENST00000419781 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
CCNT2-204ENST00000419781 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
CCNT2-204ENST00000419781 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
CCNT2-204ENST00000419781 ANP32CO43423 234 aa21.05■□□□□ 0.96
CCNT2-204ENST00000419781 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
CCNT2-204ENST00000419781 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
CCNT2-204ENST00000419781 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
CCNT2-204ENST00000419781 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCNT2-204ENST00000419781 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
CCNT2-204ENST00000419781 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
CCNT2-204ENST00000419781 STAG3Q9UJ98 1225 aa20.94■□□□□ 0.94
CCNT2-204ENST00000419781 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
CCNT2-204ENST00000419781 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
CCNT2-204ENST00000419781 BCL11AQ9H165 835 aa20.83■□□□□ 0.92
CCNT2-204ENST00000419781 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
CCNT2-204ENST00000419781 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
CCNT2-204ENST00000419781 EEA1Q15075 1411 aa20.79■□□□□ 0.92
CCNT2-204ENST00000419781 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
CCNT2-204ENST00000419781 ARID3CA6NKF2 412 aa20.75■□□□□ 0.91
CCNT2-204ENST00000419781 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
CCNT2-204ENST00000419781 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
CCNT2-204ENST00000419781 CLIP1P30622 1438 aa20.62■□□□□ 0.89
CCNT2-204ENST00000419781 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
CCNT2-204ENST00000419781 GTF3C3Q9Y5Q9 886 aa20.6■□□□□ 0.89
CCNT2-204ENST00000419781 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
CCNT2-204ENST00000419781 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
CCNT2-204ENST00000419781 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
CCNT2-204ENST00000419781 ANP32AP39687 249 aaKnown RBP20.57■□□□□ 0.88
CCNT2-204ENST00000419781 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
CCNT2-204ENST00000419781 HSP90AA1P07900 732 aaKnown RBP20.55■□□□□ 0.88
CCNT2-204ENST00000419781 UPF2Q9HAU5 1272 aaKnown RBP20.54■□□□□ 0.88
CCNT2-204ENST00000419781 WIZO95785 1651 aa20.54■□□□□ 0.88
CCNT2-204ENST00000419781 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
CCNT2-204ENST00000419781 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
CCNT2-204ENST00000419781 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
CCNT2-204ENST00000419781 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
CCNT2-204ENST00000419781 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
CCNT2-204ENST00000419781 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
CCNT2-204ENST00000419781 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
CCNT2-204ENST00000419781 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
CCNT2-204ENST00000419781 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
CCNT2-204ENST00000419781 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
CCNT2-204ENST00000419781 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
CCNT2-204ENST00000419781 A0A0G2JS52 829 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms