Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 POLE3-203ENST00000475080 455 ntTSL 218.25■□□□□ 0.515e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-208ENST00000567065 883 ntTSL 318.07■□□□□ 0.485e-6■■■□□ 17.4
XRN2Q9H0D6 TNS3-211ENST00000474346 775 ntTSL 316.19■□□□□ 0.183e-7■■■□□ 17.4
XRN2Q9H0D6 POLE3-204ENST00000479871 2396 ntTSL 214.37□□□□□ -0.115e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-203ENST00000540562 3064 ntTSL 213.77□□□□□ -0.215e-6■■■□□ 17.4
XRN2Q9H0D6 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.375e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-213ENST00000569957 4469 ntTSL 212.63□□□□□ -0.395e-6■■■□□ 17.4
XRN2Q9H0D6 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.415e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-204ENST00000562291 255 ntTSL 311.55□□□□□ -0.565e-6■■■□□ 17.4
XRN2Q9H0D6 MIR636-201ENST00000384825 99 ntBASIC10.25□□□□□ -0.771e-17■■■□□ 17.4
XRN2Q9H0D6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.83■■□□□ 1.081e-8■■■□□ 17.4
XRN2Q9H0D6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.061e-8■■■□□ 17.4
XRN2Q9H0D6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.76□□□□□ -0.051e-6■■■□□ 17.4
XRN2Q9H0D6 P4HB-205ENST00000467086 785 ntTSL 527.44■■□□□ 1.982e-6■■■□□ 17.4
XRN2Q9H0D6 EIF5-215ENST00000560763 723 ntTSL 221.83■■□□□ 1.092e-7■■■□□ 17.4
XRN2Q9H0D6 EIF5-214ENST00000560338 580 ntTSL 320.79■□□□□ 0.922e-7■■■□□ 17.4
XRN2Q9H0D6 EIF5-210ENST00000559249 704 ntTSL 219.29■□□□□ 0.682e-7■■■□□ 17.4
XRN2Q9H0D6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.52e-7■■■□□ 17.4
XRN2Q9H0D6 EIF5-216ENST00000560877 521 ntTSL 416.2■□□□□ 0.182e-7■■■□□ 17.4
XRN2Q9H0D6 MAN2A2-228ENST00000561047 1057 ntTSL 521.24■□□□□ 0.998e-17■■■□□ 17.4
XRN2Q9H0D6 MAN2A2-213ENST00000559374 851 ntTSL 519.94■□□□□ 0.788e-17■■■□□ 17.4
XRN2Q9H0D6 MAN2A2-230ENST00000561448 1443 ntTSL 213.75□□□□□ -0.218e-17■■■□□ 17.4
XRN2Q9H0D6 MAN2A2-202ENST00000557865 2671 ntTSL 212.5□□□□□ -0.418e-17■■■□□ 17.4
XRN2Q9H0D6 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.618e-17■■■□□ 17.4
XRN2Q9H0D6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.96■■■□□ 2.714e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-201ENST00000504719 754 ntTSL 230.19■■■□□ 2.424e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-204ENST00000517525 392 ntTSL 329.14■■■□□ 2.264e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.23■■□□□ 1.954e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-215ENST00000522963 568 ntTSL 413.71□□□□□ -0.214e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-216ENST00000523068 844 ntTSL 5 BASIC13.03□□□□□ -0.324e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-207ENST00000518528 624 ntTSL 311.23□□□□□ -0.614e-6■■■□□ 17.4
XRN2Q9H0D6 PVT1-205ENST00000517790 599 ntTSL 26.25□□□□□ -1.414e-6■■■□□ 17.4
XRN2Q9H0D6 CTSB-206ENST00000524500 573 ntTSL 422.47■■□□□ 1.191e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-226ENST00000532656 573 ntTSL 421.06■□□□□ 0.961e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-213ENST00000527215 545 ntTSL 419.14■□□□□ 0.651e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-210ENST00000526195 560 ntTSL 419.04■□□□□ 0.641e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-208ENST00000525076 550 ntTSL 518.6■□□□□ 0.571e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-230ENST00000534149 524 ntTSL 418.52■□□□□ 0.561e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-221ENST00000531502 557 ntTSL 417.73■□□□□ 0.431e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-231ENST00000534382 764 ntTSL 417.01■□□□□ 0.311e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-212ENST00000526645 559 ntTSL 413.62□□□□□ -0.231e-7■■■□□ 17.4
XRN2Q9H0D6 CTSB-205ENST00000505496 540 ntTSL 410.16□□□□□ -0.781e-7■■■□□ 17.4
XRN2Q9H0D6 FASN-207ENST00000635197 627 ntTSL 319.16■□□□□ 0.664e-10■■■□□ 17.4
XRN2Q9H0D6 SH3PXD2A-204ENST00000420222 3251 ntTSL 214.14□□□□□ -0.152e-6■■■□□ 17.4
XRN2Q9H0D6 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)13.16□□□□□ -0.32e-6■■■□□ 17.4
XRN2Q9H0D6 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.322e-6■■■□□ 17.4
XRN2Q9H0D6 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.052e-6■■■□□ 17.4
XRN2Q9H0D6 BNIP3-204ENST00000633835 1062 ntTSL 325.44■■□□□ 1.661e-6■■■□□ 17.4
XRN2Q9H0D6 BNIP3-203ENST00000631806 752 ntTSL 217.26■□□□□ 0.351e-6■■■□□ 17.4
XRN2Q9H0D6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.171e-6■■■□□ 17.4
XRN2Q9H0D6 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)13.41□□□□□ -0.261e-6■■■□□ 17.4
XRN2Q9H0D6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.71□□□□□ -1.347e-7■■■□□ 17.4
XRN2Q9H0D6 STAT3-214ENST00000590776 1483 nt22.43■■□□□ 1.183e-6■■■□□ 17.3
XRN2Q9H0D6 STAT3-212ENST00000588065 571 ntTSL 417.76■□□□□ 0.433e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-208ENST00000448874 1108 ntTSL 220.19■□□□□ 0.821e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-212ENST00000481928 1635 ntTSL 318.73■□□□□ 0.591e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-211ENST00000468027 621 ntTSL 1 (best)15.27■□□□□ 0.041e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-209ENST00000466801 784 ntTSL 512.61□□□□□ -0.391e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.41e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.511e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-203ENST00000409321 735 ntTSL 3 BASIC11.8□□□□□ -0.521e-6■■■□□ 17.3
XRN2Q9H0D6 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.521e-6■■■□□ 17.3
XRN2Q9H0D6 RPL3-207ENST00000459859 447 ntTSL 323.04■■□□□ 1.284e-8■■■□□ 17.3
XRN2Q9H0D6 RPL3-218ENST00000498462 669 ntTSL 322.88■■□□□ 1.254e-8■■■□□ 17.3
XRN2Q9H0D6 RPL3-208ENST00000460589 630 ntTSL 221.05■□□□□ 0.964e-8■■■□□ 17.3
XRN2Q9H0D6 RPL3-205ENST00000427905 782 ntTSL 516.93■□□□□ 0.39e-10■■■□□ 17.3
XRN2Q9H0D6 RPL3-209ENST00000461967 767 ntTSL 215.98■□□□□ 0.154e-8■■■□□ 17.3
XRN2Q9H0D6 RPL3-217ENST00000484615 827 ntTSL 215.13■□□□□ 0.014e-8■■■□□ 17.3
XRN2Q9H0D6 RPL3-204ENST00000420536 711 ntTSL 510.93□□□□□ -0.669e-10■■■□□ 17.3
XRN2Q9H0D6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.452e-7■■■□□ 17.3
XRN2Q9H0D6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.94■□□□□ 0.622e-7■■■□□ 17.3
XRN2Q9H0D6 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC12.81□□□□□ -0.366e-7■■■□□ 17.3
XRN2Q9H0D6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.21■■□□□ 1.152e-6■■■□□ 17.3
XRN2Q9H0D6 GIPR-203ENST00000585889 1414 ntTSL 1 (best)21.61■■□□□ 1.052e-6■■■□□ 17.3
XRN2Q9H0D6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.82e-6■■■□□ 17.3
XRN2Q9H0D6 GIPR-207ENST00000591322 557 ntTSL 419.57■□□□□ 0.722e-6■■■□□ 17.3
XRN2Q9H0D6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.362e-6■■■□□ 17.3
XRN2Q9H0D6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.32■■□□□ 1.641e-7■■■□□ 17.3
XRN2Q9H0D6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.461e-7■■■□□ 17.3
XRN2Q9H0D6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.261e-7■■■□□ 17.3
XRN2Q9H0D6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.071e-7■■■□□ 17.3
XRN2Q9H0D6 DAZAP1-210ENST00000592453 1021 ntTSL 516.05■□□□□ 0.161e-7■■■□□ 17.3
XRN2Q9H0D6 CBFA2T3-204ENST00000563640 664 ntTSL 218.82■□□□□ 0.62e-6■■■□□ 17.3
XRN2Q9H0D6 EPB41-210ENST00000482464 675 ntTSL 220.6■□□□□ 0.898e-9■■■□□ 17.3
XRN2Q9H0D6 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC11.18□□□□□ -0.628e-9■■■□□ 17.3
XRN2Q9H0D6 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC10.27□□□□□ -0.778e-9■■■□□ 17.3
XRN2Q9H0D6 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.55□□□□□ -0.888e-9■■■□□ 17.3
XRN2Q9H0D6 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.28□□□□□ -1.088e-9■■■□□ 17.3
XRN2Q9H0D6 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.178e-9■■■□□ 17.3
XRN2Q9H0D6 UBAC1-206ENST00000489050 864 ntTSL 312.16□□□□□ -0.464e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.422e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.87■■■□□ 2.212e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-217ENST00000540382 1677 ntTSL 528.43■■■□□ 2.142e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-209ENST00000442210 716 ntTSL 327.06■■□□□ 1.922e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-218ENST00000540708 1782 ntTSL 226.35■■□□□ 1.812e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)26.24■■□□□ 1.792e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.772e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.632e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.622e-6■■■□□ 17.3
XRN2Q9H0D6 ARL6IP4-214ENST00000536502 1273 ntTSL 224.84■■□□□ 1.572e-6■■■□□ 17.3
Retrieved 100 of 21,068 protein–RNA pairs in 123.1 ms