RNA–Protein interactions for RNA: ENST00000374169.7

POLE3-201, Transcript of DNA polymerase epsilon 3, accessory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLE3, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3-201ENST00000374169 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
POLE3-201ENST00000374169 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
POLE3-201ENST00000374169 ABCC9O60706 1549 aa22.42■■□□□ 1.18
POLE3-201ENST00000374169 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
POLE3-201ENST00000374169 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
POLE3-201ENST00000374169 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
POLE3-201ENST00000374169 NACADO15069 1562 aa21.82■■□□□ 1.08
POLE3-201ENST00000374169 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
POLE3-201ENST00000374169 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
POLE3-201ENST00000374169 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
POLE3-201ENST00000374169 SCRIBQ14160 1630 aa21.3■■□□□ 1
POLE3-201ENST00000374169 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
POLE3-201ENST00000374169 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.95
POLE3-201ENST00000374169 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
POLE3-201ENST00000374169 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
POLE3-201ENST00000374169 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
POLE3-201ENST00000374169 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
POLE3-201ENST00000374169 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
POLE3-201ENST00000374169 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
POLE3-201ENST00000374169 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.85
POLE3-201ENST00000374169 RSF1Q96T23 1441 aaPredicted RBP20.24■□□□□ 0.83
POLE3-201ENST00000374169 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
POLE3-201ENST00000374169 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
POLE3-201ENST00000374169 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
POLE3-201ENST00000374169 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
POLE3-201ENST00000374169 WIZO95785 1651 aa20.16■□□□□ 0.82
POLE3-201ENST00000374169 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
POLE3-201ENST00000374169 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
POLE3-201ENST00000374169 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
POLE3-201ENST00000374169 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
POLE3-201ENST00000374169 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
POLE3-201ENST00000374169 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
POLE3-201ENST00000374169 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
POLE3-201ENST00000374169 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
POLE3-201ENST00000374169 NESP48681 1621 aa19.53■□□□□ 0.72
POLE3-201ENST00000374169 CFTRP13569 1480 aa19.53■□□□□ 0.72
POLE3-201ENST00000374169 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
POLE3-201ENST00000374169 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
POLE3-201ENST00000374169 KIF21AQ7Z4S6 1674 aa19.35■□□□□ 0.69
POLE3-201ENST00000374169 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
POLE3-201ENST00000374169 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
POLE3-201ENST00000374169 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
POLE3-201ENST00000374169 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.66
POLE3-201ENST00000374169 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
POLE3-201ENST00000374169 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
POLE3-201ENST00000374169 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
POLE3-201ENST00000374169 WDR62O43379 1518 aa19.12■□□□□ 0.65
POLE3-201ENST00000374169 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
POLE3-201ENST00000374169 CUX1P39880 1505 aa19.08■□□□□ 0.65
POLE3-201ENST00000374169 TOPBP1Q92547 1522 aa19.08■□□□□ 0.64
POLE3-201ENST00000374169 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
POLE3-201ENST00000374169 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
POLE3-201ENST00000374169 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
POLE3-201ENST00000374169 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
POLE3-201ENST00000374169 CUX2O14529 1486 aa18.97■□□□□ 0.63
POLE3-201ENST00000374169 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
POLE3-201ENST00000374169 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
POLE3-201ENST00000374169 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
POLE3-201ENST00000374169 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
POLE3-201ENST00000374169 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
POLE3-201ENST00000374169 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.61
POLE3-201ENST00000374169 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
POLE3-201ENST00000374169 SOGA1O94964 1423 aa18.82■□□□□ 0.6
POLE3-201ENST00000374169 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
POLE3-201ENST00000374169 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
POLE3-201ENST00000374169 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
POLE3-201ENST00000374169 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
POLE3-201ENST00000374169 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
POLE3-201ENST00000374169 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
POLE3-201ENST00000374169 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■■■ 31
POLE3-201ENST00000374169 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
POLE3-201ENST00000374169 PBRM1Q86U86 1689 aa18.62■□□□□ 0.57
POLE3-201ENST00000374169 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
POLE3-201ENST00000374169 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
POLE3-201ENST00000374169 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
POLE3-201ENST00000374169 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
POLE3-201ENST00000374169 EEA1Q15075 1411 aa18.53■□□□□ 0.56
POLE3-201ENST00000374169 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
POLE3-201ENST00000374169 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
POLE3-201ENST00000374169 IGF1RP08069 1367 aa18.5■□□□□ 0.55
POLE3-201ENST00000374169 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
POLE3-201ENST00000374169 CUL7Q14999 1698 aa18.48■□□□□ 0.55
POLE3-201ENST00000374169 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
POLE3-201ENST00000374169 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
POLE3-201ENST00000374169 CHD1O14646 1710 aa18.41■□□□□ 0.54
POLE3-201ENST00000374169 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
POLE3-201ENST00000374169 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
POLE3-201ENST00000374169 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.54
POLE3-201ENST00000374169 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
POLE3-201ENST00000374169 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
POLE3-201ENST00000374169 KIF21BO75037 1637 aa18.35■□□□□ 0.53
POLE3-201ENST00000374169 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
POLE3-201ENST00000374169 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
POLE3-201ENST00000374169 FBLN2P98095 1184 aa18.29■□□□□ 0.52
POLE3-201ENST00000374169 NUP160Q12769 1436 aa18.27■□□□□ 0.52
POLE3-201ENST00000374169 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
POLE3-201ENST00000374169 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
POLE3-201ENST00000374169 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
POLE3-201ENST00000374169 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
POLE3-201ENST00000374169 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms