RNA–Protein interactions for RNA: ENST00000563640.1

CBFA2T3-204, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-204ENST00000563640 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
CBFA2T3-204ENST00000563640 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
CBFA2T3-204ENST00000563640 ABCC9O60706 1549 aa34.76■■■■□ 3.15
CBFA2T3-204ENST00000563640 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
CBFA2T3-204ENST00000563640 NACADO15069 1562 aa33■■■□□ 2.87
CBFA2T3-204ENST00000563640 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
CBFA2T3-204ENST00000563640 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
CBFA2T3-204ENST00000563640 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
CBFA2T3-204ENST00000563640 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
CBFA2T3-204ENST00000563640 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
CBFA2T3-204ENST00000563640 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
CBFA2T3-204ENST00000563640 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
CBFA2T3-204ENST00000563640 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
CBFA2T3-204ENST00000563640 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
CBFA2T3-204ENST00000563640 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
CBFA2T3-204ENST00000563640 CC2D2AQ9P2K1 1620 aa31.45■■■□□ 2.62
CBFA2T3-204ENST00000563640 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
CBFA2T3-204ENST00000563640 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
CBFA2T3-204ENST00000563640 SMARCA4P51532 1647 aa30.53■■■□□ 2.48
CBFA2T3-204ENST00000563640 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
CBFA2T3-204ENST00000563640 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
CBFA2T3-204ENST00000563640 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
CBFA2T3-204ENST00000563640 SMARCA2P51531 1590 aa30.33■■■□□ 2.45
CBFA2T3-204ENST00000563640 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
CBFA2T3-204ENST00000563640 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
CBFA2T3-204ENST00000563640 PEG3Q9GZU2 1588 aa30.21■■■□□ 2.43
CBFA2T3-204ENST00000563640 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
CBFA2T3-204ENST00000563640 NESP48681 1621 aa29.99■■■□□ 2.39
CBFA2T3-204ENST00000563640 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
CBFA2T3-204ENST00000563640 WIZO95785 1651 aa29.9■■■□□ 2.38
CBFA2T3-204ENST00000563640 CUX2O14529 1486 aa29.78■■■□□ 2.36
CBFA2T3-204ENST00000563640 LAMC3Q9Y6N6 1575 aa29.74■■■□□ 2.35
CBFA2T3-204ENST00000563640 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
CBFA2T3-204ENST00000563640 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
CBFA2T3-204ENST00000563640 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
CBFA2T3-204ENST00000563640 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
CBFA2T3-204ENST00000563640 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
CBFA2T3-204ENST00000563640 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
CBFA2T3-204ENST00000563640 DNAJC5Q9H3Z4 198 aa29.4■■■□□ 2.3
CBFA2T3-204ENST00000563640 MRC2Q9UBG0 1479 aa29.29■■■□□ 2.28
CBFA2T3-204ENST00000563640 CFTRP13569 1480 aa29.28■■■□□ 2.28
CBFA2T3-204ENST00000563640 WDR62O43379 1518 aa29.26■■■□□ 2.27
CBFA2T3-204ENST00000563640 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
CBFA2T3-204ENST00000563640 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
CBFA2T3-204ENST00000563640 PRDM2Q13029 1718 aa29.14■■■□□ 2.26
CBFA2T3-204ENST00000563640 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
CBFA2T3-204ENST00000563640 URB2Q14146 1524 aaKnown RBP29.03■■■□□ 2.24
CBFA2T3-204ENST00000563640 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
CBFA2T3-204ENST00000563640 DNMBPQ6XZF7 1577 aa28.65■■■□□ 2.18
CBFA2T3-204ENST00000563640 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
CBFA2T3-204ENST00000563640 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
CBFA2T3-204ENST00000563640 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
CBFA2T3-204ENST00000563640 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
CBFA2T3-204ENST00000563640 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
CBFA2T3-204ENST00000563640 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
CBFA2T3-204ENST00000563640 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
CBFA2T3-204ENST00000563640 CUX1P39880 1505 aa28.38■■■□□ 2.13
CBFA2T3-204ENST00000563640 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.13
CBFA2T3-204ENST00000563640 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
CBFA2T3-204ENST00000563640 OSCARQ8IYS5 282 aa28.35■■■□□ 2.13
CBFA2T3-204ENST00000563640 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
CBFA2T3-204ENST00000563640 CHD1O14646 1710 aa28.28■■■□□ 2.12
CBFA2T3-204ENST00000563640 SOGA1O94964 1423 aa28.25■■■□□ 2.11
CBFA2T3-204ENST00000563640 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
CBFA2T3-204ENST00000563640 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CBFA2T3-204ENST00000563640 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
CBFA2T3-204ENST00000563640 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
CBFA2T3-204ENST00000563640 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
CBFA2T3-204ENST00000563640 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
CBFA2T3-204ENST00000563640 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
CBFA2T3-204ENST00000563640 ARHGEF11O15085 1522 aa28.08■■■□□ 2.08
CBFA2T3-204ENST00000563640 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
CBFA2T3-204ENST00000563640 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
CBFA2T3-204ENST00000563640 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
CBFA2T3-204ENST00000563640 SYNJ1O43426 1573 aa28■■■□□ 2.07
CBFA2T3-204ENST00000563640 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
CBFA2T3-204ENST00000563640 GRIN2BQ13224 1484 aa27.99■■■□□ 2.07
CBFA2T3-204ENST00000563640 FBLN2P98095 1184 aa27.98■■■□□ 2.07
CBFA2T3-204ENST00000563640 MAGI1Q96QZ7 1491 aaPredicted RBP27.97■■■□□ 2.07
CBFA2T3-204ENST00000563640 TOP2BQ02880 1626 aa27.97■■■□□ 2.07
CBFA2T3-204ENST00000563640 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
CBFA2T3-204ENST00000563640 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
CBFA2T3-204ENST00000563640 WRNQ14191 1432 aaPredicted RBP eCLIP27.91■■■□□ 2.062e-6■■■■■ 28.4
CBFA2T3-204ENST00000563640 SYNJ2O15056 1496 aa27.89■■■□□ 2.05
CBFA2T3-204ENST00000563640 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
CBFA2T3-204ENST00000563640 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
CBFA2T3-204ENST00000563640 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
CBFA2T3-204ENST00000563640 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
CBFA2T3-204ENST00000563640 GRIN2AQ12879 1464 aa27.68■■■□□ 2.02
CBFA2T3-204ENST00000563640 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
CBFA2T3-204ENST00000563640 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
CBFA2T3-204ENST00000563640 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
CBFA2T3-204ENST00000563640 NUP160Q12769 1436 aa27.58■■■□□ 2
CBFA2T3-204ENST00000563640 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
CBFA2T3-204ENST00000563640 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
CBFA2T3-204ENST00000563640 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
CBFA2T3-204ENST00000563640 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
CBFA2T3-204ENST00000563640 CUL7Q14999 1698 aa27.31■■□□□ 1.96
CBFA2T3-204ENST00000563640 IGF1RP08069 1367 aa27.31■■□□□ 1.96
CBFA2T3-204ENST00000563640 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms