RNA–Protein interactions for RNA: ENST00000347529.7

EPB41-202, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-202ENST00000347529 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
EPB41-202ENST00000347529 HRCP23327 699 aa14.61□□□□□ -0.07
EPB41-202ENST00000347529 SHROOM4Q9ULL8 1493 aa14.58□□□□□ -0.08
EPB41-202ENST00000347529 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.08
EPB41-202ENST00000347529 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.12
EPB41-202ENST00000347529 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
EPB41-202ENST00000347529 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
EPB41-202ENST00000347529 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
EPB41-202ENST00000347529 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
EPB41-202ENST00000347529 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
EPB41-202ENST00000347529 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
EPB41-202ENST00000347529 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
EPB41-202ENST00000347529 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
EPB41-202ENST00000347529 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
EPB41-202ENST00000347529 LOC105371045A0A1W2PR82 267 aa13.88□□□□□ -0.19
EPB41-202ENST00000347529 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
EPB41-202ENST00000347529 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
EPB41-202ENST00000347529 ABCC9O60706 1549 aa13.57□□□□□ -0.24
EPB41-202ENST00000347529 MYT1Q01538 1121 aa13.55□□□□□ -0.24
EPB41-202ENST00000347529 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
EPB41-202ENST00000347529 ACIN1Q9UKV3 1341 aaKnown RBP13.47□□□□□ -0.25
EPB41-202ENST00000347529 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
EPB41-202ENST00000347529 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
EPB41-202ENST00000347529 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
EPB41-202ENST00000347529 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
EPB41-202ENST00000347529 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
EPB41-202ENST00000347529 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
EPB41-202ENST00000347529 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
EPB41-202ENST00000347529 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
EPB41-202ENST00000347529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
EPB41-202ENST00000347529 SCRIBQ14160 1630 aa13.27□□□□□ -0.29
EPB41-202ENST00000347529 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
EPB41-202ENST00000347529 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
EPB41-202ENST00000347529 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.316e-6■■□□□ 13.8
EPB41-202ENST00000347529 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
EPB41-202ENST00000347529 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
EPB41-202ENST00000347529 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
EPB41-202ENST00000347529 WIZO95785 1651 aa13.03□□□□□ -0.32
EPB41-202ENST00000347529 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
EPB41-202ENST00000347529 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
EPB41-202ENST00000347529 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
EPB41-202ENST00000347529 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
EPB41-202ENST00000347529 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
EPB41-202ENST00000347529 NACADO15069 1562 aa12.96□□□□□ -0.34
EPB41-202ENST00000347529 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
EPB41-202ENST00000347529 MIER1Q8N108 512 aa12.91□□□□□ -0.34
EPB41-202ENST00000347529 EEA1Q15075 1411 aa12.91□□□□□ -0.34
EPB41-202ENST00000347529 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
EPB41-202ENST00000347529 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
EPB41-202ENST00000347529 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
EPB41-202ENST00000347529 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
EPB41-202ENST00000347529 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
EPB41-202ENST00000347529 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
EPB41-202ENST00000347529 SOGA1O94964 1423 aa12.82□□□□□ -0.36
EPB41-202ENST00000347529 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
EPB41-202ENST00000347529 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
EPB41-202ENST00000347529 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
EPB41-202ENST00000347529 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
EPB41-202ENST00000347529 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
EPB41-202ENST00000347529 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
EPB41-202ENST00000347529 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
EPB41-202ENST00000347529 APLP2Q06481 763 aa12.69□□□□□ -0.38
EPB41-202ENST00000347529 KIF21BO75037 1637 aa12.69□□□□□ -0.38
EPB41-202ENST00000347529 VPS8Q8N3P4 1428 aa12.68□□□□□ -0.38
EPB41-202ENST00000347529 CLIP1P30622 1438 aa12.67□□□□□ -0.38
EPB41-202ENST00000347529 ANP32EQ9BTT0 268 aa12.64□□□□□ -0.39
EPB41-202ENST00000347529 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
EPB41-202ENST00000347529 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
EPB41-202ENST00000347529 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
EPB41-202ENST00000347529 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
EPB41-202ENST00000347529 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
EPB41-202ENST00000347529 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
EPB41-202ENST00000347529 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
EPB41-202ENST00000347529 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
EPB41-202ENST00000347529 CUX2O14529 1486 aa12.45□□□□□ -0.42
EPB41-202ENST00000347529 RRBP1Q9P2E9 1410 aaKnown RBP12.44□□□□□ -0.42
EPB41-202ENST00000347529 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
EPB41-202ENST00000347529 RANGAP1P46060 587 aaPredicted RBP12.42□□□□□ -0.42
EPB41-202ENST00000347529 FKBP8Q14318 412 aa12.4□□□□□ -0.42
EPB41-202ENST00000347529 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
EPB41-202ENST00000347529 NEFLP07196 543 aa12.39□□□□□ -0.43
EPB41-202ENST00000347529 TOP2BQ02880 1626 aa12.38□□□□□ -0.43
EPB41-202ENST00000347529 BCANQ96GW7 911 aa12.37□□□□□ -0.43
EPB41-202ENST00000347529 CCNB3Q8WWL7 1395 aa12.37□□□□□ -0.43
EPB41-202ENST00000347529 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
EPB41-202ENST00000347529 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
EPB41-202ENST00000347529 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
EPB41-202ENST00000347529 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
EPB41-202ENST00000347529 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
EPB41-202ENST00000347529 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
EPB41-202ENST00000347529 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
EPB41-202ENST00000347529 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
EPB41-202ENST00000347529 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
EPB41-202ENST00000347529 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
EPB41-202ENST00000347529 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
EPB41-202ENST00000347529 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
EPB41-202ENST00000347529 ITGAEP38570 1179 aa12.26□□□□□ -0.45
EPB41-202ENST00000347529 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
EPB41-202ENST00000347529 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
EPB41-202ENST00000347529 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms