RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
CTSB-213ENST00000527215 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.29
CTSB-213ENST00000527215 ABCC9O60706 1549 aa35.01■■■■□ 3.2
CTSB-213ENST00000527215 RB1CC1Q8TDY2 1594 aa33.57■■■□□ 2.96
CTSB-213ENST00000527215 NACADO15069 1562 aa33.43■■■□□ 2.94
CTSB-213ENST00000527215 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CTSB-213ENST00000527215 MYO15BQ96JP2 1530 aa33.1■■■□□ 2.89
CTSB-213ENST00000527215 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
CTSB-213ENST00000527215 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
CTSB-213ENST00000527215 DCAF1Q9Y4B6 1507 aa32.86■■■□□ 2.85
CTSB-213ENST00000527215 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
CTSB-213ENST00000527215 PABPN1Q86U42 306 aaKnown RBP eCLIP32.61■■■□□ 2.81
CTSB-213ENST00000527215 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
CTSB-213ENST00000527215 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
CTSB-213ENST00000527215 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
CTSB-213ENST00000527215 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
CTSB-213ENST00000527215 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
CTSB-213ENST00000527215 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
CTSB-213ENST00000527215 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
CTSB-213ENST00000527215 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
CTSB-213ENST00000527215 NCAPD3P42695 1498 aa30.81■■■□□ 2.52
CTSB-213ENST00000527215 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
CTSB-213ENST00000527215 SMARCA2P51531 1590 aa30.77■■■□□ 2.52
CTSB-213ENST00000527215 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
CTSB-213ENST00000527215 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
CTSB-213ENST00000527215 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
CTSB-213ENST00000527215 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
CTSB-213ENST00000527215 WIZO95785 1651 aa30.36■■■□□ 2.45
CTSB-213ENST00000527215 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
CTSB-213ENST00000527215 CUX2O14529 1486 aa30.25■■■□□ 2.43
CTSB-213ENST00000527215 NESP48681 1621 aa30.22■■■□□ 2.43
CTSB-213ENST00000527215 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
CTSB-213ENST00000527215 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
CTSB-213ENST00000527215 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
CTSB-213ENST00000527215 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
CTSB-213ENST00000527215 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
CTSB-213ENST00000527215 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
CTSB-213ENST00000527215 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
CTSB-213ENST00000527215 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
CTSB-213ENST00000527215 CFTRP13569 1480 aa29.66■■■□□ 2.34
CTSB-213ENST00000527215 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
CTSB-213ENST00000527215 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
CTSB-213ENST00000527215 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
CTSB-213ENST00000527215 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
CTSB-213ENST00000527215 CEP164Q9UPV0 1460 aa29.58■■■□□ 2.33
CTSB-213ENST00000527215 WDR62O43379 1518 aa29.54■■■□□ 2.32
CTSB-213ENST00000527215 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
CTSB-213ENST00000527215 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
CTSB-213ENST00000527215 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
CTSB-213ENST00000527215 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
CTSB-213ENST00000527215 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
CTSB-213ENST00000527215 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
CTSB-213ENST00000527215 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
CTSB-213ENST00000527215 TARBP1Q13395 1621 aaKnown RBP28.84■■■□□ 2.21
CTSB-213ENST00000527215 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
CTSB-213ENST00000527215 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
CTSB-213ENST00000527215 OSCARQ8IYS5 282 aa28.81■■■□□ 2.2
CTSB-213ENST00000527215 TRIM41Q8WV44 630 aa28.8■■■□□ 2.2
CTSB-213ENST00000527215 CUX1P39880 1505 aa28.77■■■□□ 2.2
CTSB-213ENST00000527215 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
CTSB-213ENST00000527215 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
CTSB-213ENST00000527215 SOGA1O94964 1423 aa28.66■■■□□ 2.18
CTSB-213ENST00000527215 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.182e-8■■■■■ 40.1
CTSB-213ENST00000527215 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
CTSB-213ENST00000527215 CHD1O14646 1710 aa28.57■■■□□ 2.16
CTSB-213ENST00000527215 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
CTSB-213ENST00000527215 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
CTSB-213ENST00000527215 TOP2BQ02880 1626 aa28.46■■■□□ 2.15
CTSB-213ENST00000527215 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
CTSB-213ENST00000527215 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
CTSB-213ENST00000527215 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
CTSB-213ENST00000527215 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
CTSB-213ENST00000527215 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
CTSB-213ENST00000527215 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
CTSB-213ENST00000527215 SNAPC4Q5SXM2 1469 aa28.4■■■□□ 2.14
CTSB-213ENST00000527215 ABCA10Q8WWZ4 1543 aa28.4■■■□□ 2.14
CTSB-213ENST00000527215 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.13
CTSB-213ENST00000527215 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
CTSB-213ENST00000527215 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
CTSB-213ENST00000527215 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CTSB-213ENST00000527215 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
CTSB-213ENST00000527215 FBLN2P98095 1184 aa28.34■■■□□ 2.13
CTSB-213ENST00000527215 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
CTSB-213ENST00000527215 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
CTSB-213ENST00000527215 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
CTSB-213ENST00000527215 ADAMTS12P58397 1594 aa28.13■■■□□ 2.09
CTSB-213ENST00000527215 CYB5RLQ6IPT4 315 aa28.1■■■□□ 2.09
CTSB-213ENST00000527215 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
CTSB-213ENST00000527215 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
CTSB-213ENST00000527215 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
CTSB-213ENST00000527215 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
CTSB-213ENST00000527215 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
CTSB-213ENST00000527215 NUP160Q12769 1436 aa27.89■■■□□ 2.06
CTSB-213ENST00000527215 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
CTSB-213ENST00000527215 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
CTSB-213ENST00000527215 CUL7Q14999 1698 aa27.81■■■□□ 2.04
CTSB-213ENST00000527215 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
CTSB-213ENST00000527215 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
CTSB-213ENST00000527215 IGF1RP08069 1367 aa27.74■■■□□ 2.03
CTSB-213ENST00000527215 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms