RNA–Protein interactions for RNA: ENST00000356093.6

EPB41-204, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5 BASIC

Gene EPB41, Length 5,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-204ENST00000356093 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
EPB41-204ENST00000356093 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
EPB41-204ENST00000356093 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
EPB41-204ENST00000356093 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
EPB41-204ENST00000356093 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
EPB41-204ENST00000356093 MYT1Q01538 1121 aa14.72□□□□□ -0.05
EPB41-204ENST00000356093 APLP2Q06481 763 aa14.68□□□□□ -0.06
EPB41-204ENST00000356093 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
EPB41-204ENST00000356093 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
EPB41-204ENST00000356093 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
EPB41-204ENST00000356093 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
EPB41-204ENST00000356093 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
EPB41-204ENST00000356093 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
EPB41-204ENST00000356093 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
EPB41-204ENST00000356093 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
EPB41-204ENST00000356093 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
EPB41-204ENST00000356093 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.17
EPB41-204ENST00000356093 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
EPB41-204ENST00000356093 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
EPB41-204ENST00000356093 ATP1B4Q9UN42 357 aaPredicted RBP13.95□□□□□ -0.18
EPB41-204ENST00000356093 NEFLP07196 543 aa13.89□□□□□ -0.19
EPB41-204ENST00000356093 HRCP23327 699 aa13.85□□□□□ -0.19
EPB41-204ENST00000356093 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
EPB41-204ENST00000356093 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
EPB41-204ENST00000356093 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
EPB41-204ENST00000356093 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
EPB41-204ENST00000356093 ABCC9O60706 1549 aa13.52□□□□□ -0.24
EPB41-204ENST00000356093 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
EPB41-204ENST00000356093 ITGAEP38570 1179 aa13.51□□□□□ -0.25
EPB41-204ENST00000356093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
EPB41-204ENST00000356093 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
EPB41-204ENST00000356093 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
EPB41-204ENST00000356093 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
EPB41-204ENST00000356093 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
EPB41-204ENST00000356093 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
EPB41-204ENST00000356093 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
EPB41-204ENST00000356093 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
EPB41-204ENST00000356093 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
EPB41-204ENST00000356093 SCRIBQ14160 1630 aa13.27□□□□□ -0.28
EPB41-204ENST00000356093 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
EPB41-204ENST00000356093 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
EPB41-204ENST00000356093 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
EPB41-204ENST00000356093 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
EPB41-204ENST00000356093 ANP32CO43423 234 aa13.19□□□□□ -0.3
EPB41-204ENST00000356093 NEUROD1Q13562 356 aa13.15□□□□□ -0.3
EPB41-204ENST00000356093 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
EPB41-204ENST00000356093 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
EPB41-204ENST00000356093 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
EPB41-204ENST00000356093 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
EPB41-204ENST00000356093 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
EPB41-204ENST00000356093 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
EPB41-204ENST00000356093 RB1CC1Q8TDY2 1594 aa13.05□□□□□ -0.32
EPB41-204ENST00000356093 EEA1Q15075 1411 aa13.02□□□□□ -0.33
EPB41-204ENST00000356093 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
EPB41-204ENST00000356093 NACADO15069 1562 aa12.98□□□□□ -0.33
EPB41-204ENST00000356093 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
EPB41-204ENST00000356093 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.34
EPB41-204ENST00000356093 FBLN2P98095 1184 aa12.93□□□□□ -0.34
EPB41-204ENST00000356093 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
EPB41-204ENST00000356093 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
EPB41-204ENST00000356093 BCANQ96GW7 911 aa12.9□□□□□ -0.34
EPB41-204ENST00000356093 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
EPB41-204ENST00000356093 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
EPB41-204ENST00000356093 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
EPB41-204ENST00000356093 NEFMP07197 916 aa12.86□□□□□ -0.35
EPB41-204ENST00000356093 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
EPB41-204ENST00000356093 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
EPB41-204ENST00000356093 CLIP1P30622 1438 aa12.84□□□□□ -0.35
EPB41-204ENST00000356093 ANP32AP39687 249 aaKnown RBP12.82□□□□□ -0.36
EPB41-204ENST00000356093 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
EPB41-204ENST00000356093 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
EPB41-204ENST00000356093 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
EPB41-204ENST00000356093 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
EPB41-204ENST00000356093 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
EPB41-204ENST00000356093 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
EPB41-204ENST00000356093 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
EPB41-204ENST00000356093 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
EPB41-204ENST00000356093 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
EPB41-204ENST00000356093 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.376e-6■■□□□ 13.8
EPB41-204ENST00000356093 FKBP8Q14318 412 aa12.7□□□□□ -0.38
EPB41-204ENST00000356093 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
EPB41-204ENST00000356093 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.385e-9■□□□□ 10.1
EPB41-204ENST00000356093 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
EPB41-204ENST00000356093 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
EPB41-204ENST00000356093 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
EPB41-204ENST00000356093 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
EPB41-204ENST00000356093 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
EPB41-204ENST00000356093 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
EPB41-204ENST00000356093 UPF2Q9HAU5 1272 aaKnown RBP12.63□□□□□ -0.39
EPB41-204ENST00000356093 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
EPB41-204ENST00000356093 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
EPB41-204ENST00000356093 CHIC2Q9UKJ5 165 aa12.6□□□□□ -0.39
EPB41-204ENST00000356093 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.394e-7■■□□□ 13.3
EPB41-204ENST00000356093 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
EPB41-204ENST00000356093 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
EPB41-204ENST00000356093 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
EPB41-204ENST00000356093 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
EPB41-204ENST00000356093 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
EPB41-204ENST00000356093 MRS2Q9HD23 443 aa12.56□□□□□ -0.4
EPB41-204ENST00000356093 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms