RNA–Protein interactions for RNA: ENST00000374171.4

POLE3-202, Transcript of DNA polymerase epsilon 3, accessory subunit, humanhuman

APPRIS P1 TSL 2 BASIC

Gene POLE3, Length 2,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3-202ENST00000374171 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
POLE3-202ENST00000374171 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
POLE3-202ENST00000374171 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
POLE3-202ENST00000374171 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
POLE3-202ENST00000374171 ABCC9O60706 1549 aa22.32■■□□□ 1.16
POLE3-202ENST00000374171 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
POLE3-202ENST00000374171 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
POLE3-202ENST00000374171 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
POLE3-202ENST00000374171 NACADO15069 1562 aa21.86■■□□□ 1.09
POLE3-202ENST00000374171 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
POLE3-202ENST00000374171 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
POLE3-202ENST00000374171 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
POLE3-202ENST00000374171 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
POLE3-202ENST00000374171 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
POLE3-202ENST00000374171 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
POLE3-202ENST00000374171 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
POLE3-202ENST00000374171 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
POLE3-202ENST00000374171 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
POLE3-202ENST00000374171 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
POLE3-202ENST00000374171 WIZO95785 1651 aa20.78■□□□□ 0.92
POLE3-202ENST00000374171 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
POLE3-202ENST00000374171 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
POLE3-202ENST00000374171 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
POLE3-202ENST00000374171 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
POLE3-202ENST00000374171 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
POLE3-202ENST00000374171 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
POLE3-202ENST00000374171 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
POLE3-202ENST00000374171 CCDC88BA6NC98 1476 aa20.34■□□□□ 0.85
POLE3-202ENST00000374171 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
POLE3-202ENST00000374171 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
POLE3-202ENST00000374171 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
POLE3-202ENST00000374171 HMGXB3Q12766 1538 aa20.14■□□□□ 0.82
POLE3-202ENST00000374171 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
POLE3-202ENST00000374171 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
POLE3-202ENST00000374171 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
POLE3-202ENST00000374171 CFTRP13569 1480 aa19.79■□□□□ 0.76
POLE3-202ENST00000374171 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
POLE3-202ENST00000374171 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
POLE3-202ENST00000374171 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
POLE3-202ENST00000374171 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
POLE3-202ENST00000374171 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
POLE3-202ENST00000374171 NESP48681 1621 aa19.64■□□□□ 0.73
POLE3-202ENST00000374171 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
POLE3-202ENST00000374171 SOGA1O94964 1423 aa19.61■□□□□ 0.73
POLE3-202ENST00000374171 HRCP23327 699 aa19.6■□□□□ 0.73
POLE3-202ENST00000374171 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
POLE3-202ENST00000374171 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
POLE3-202ENST00000374171 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
POLE3-202ENST00000374171 CUX1P39880 1505 aa19.56■□□□□ 0.72
POLE3-202ENST00000374171 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
POLE3-202ENST00000374171 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
POLE3-202ENST00000374171 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
POLE3-202ENST00000374171 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
POLE3-202ENST00000374171 EEA1Q15075 1411 aa19.41■□□□□ 0.7
POLE3-202ENST00000374171 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
POLE3-202ENST00000374171 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
POLE3-202ENST00000374171 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
POLE3-202ENST00000374171 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
POLE3-202ENST00000374171 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
POLE3-202ENST00000374171 DNMBPQ6XZF7 1577 aa19.3■□□□□ 0.68
POLE3-202ENST00000374171 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
POLE3-202ENST00000374171 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
POLE3-202ENST00000374171 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
POLE3-202ENST00000374171 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
POLE3-202ENST00000374171 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
POLE3-202ENST00000374171 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
POLE3-202ENST00000374171 CUX2O14529 1486 aa19.21■□□□□ 0.67
POLE3-202ENST00000374171 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
POLE3-202ENST00000374171 KIF21BO75037 1637 aa19.18■□□□□ 0.66
POLE3-202ENST00000374171 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
POLE3-202ENST00000374171 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
POLE3-202ENST00000374171 IGF1RP08069 1367 aa19.13■□□□□ 0.65
POLE3-202ENST00000374171 PRXQ9BXM0 1461 aa19.13■□□□□ 0.65
POLE3-202ENST00000374171 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
POLE3-202ENST00000374171 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
POLE3-202ENST00000374171 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
POLE3-202ENST00000374171 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
POLE3-202ENST00000374171 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
POLE3-202ENST00000374171 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
POLE3-202ENST00000374171 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
POLE3-202ENST00000374171 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
POLE3-202ENST00000374171 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
POLE3-202ENST00000374171 WDR62O43379 1518 aa19.01■□□□□ 0.63
POLE3-202ENST00000374171 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
POLE3-202ENST00000374171 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
POLE3-202ENST00000374171 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
POLE3-202ENST00000374171 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
POLE3-202ENST00000374171 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
POLE3-202ENST00000374171 CLIP1P30622 1438 aa18.93■□□□□ 0.62
POLE3-202ENST00000374171 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■■■■ 31
POLE3-202ENST00000374171 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
POLE3-202ENST00000374171 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
POLE3-202ENST00000374171 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
POLE3-202ENST00000374171 CUL7Q14999 1698 aa18.85■□□□□ 0.61
POLE3-202ENST00000374171 ZEB1P37275 1124 aaPredicted RBP18.83■□□□□ 0.6
POLE3-202ENST00000374171 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
POLE3-202ENST00000374171 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
POLE3-202ENST00000374171 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
POLE3-202ENST00000374171 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
POLE3-202ENST00000374171 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms