RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
SH3PXD2A-203ENST00000369774 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
SH3PXD2A-203ENST00000369774 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
SH3PXD2A-203ENST00000369774 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
SH3PXD2A-203ENST00000369774 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
SH3PXD2A-203ENST00000369774 APLP2Q06481 763 aa20.56■□□□□ 0.88
SH3PXD2A-203ENST00000369774 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
SH3PXD2A-203ENST00000369774 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
SH3PXD2A-203ENST00000369774 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
SH3PXD2A-203ENST00000369774 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
SH3PXD2A-203ENST00000369774 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SH3PXD2A-203ENST00000369774 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
SH3PXD2A-203ENST00000369774 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
SH3PXD2A-203ENST00000369774 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
SH3PXD2A-203ENST00000369774 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
SH3PXD2A-203ENST00000369774 NEFLP07196 543 aa19.61■□□□□ 0.73
SH3PXD2A-203ENST00000369774 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
SH3PXD2A-203ENST00000369774 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
SH3PXD2A-203ENST00000369774 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
SH3PXD2A-203ENST00000369774 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
SH3PXD2A-203ENST00000369774 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
SH3PXD2A-203ENST00000369774 DAXXQ9UER7 740 aaPredicted RBP19.27■□□□□ 0.67
SH3PXD2A-203ENST00000369774 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
SH3PXD2A-203ENST00000369774 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
SH3PXD2A-203ENST00000369774 MYT1Q01538 1121 aa19.21■□□□□ 0.67
SH3PXD2A-203ENST00000369774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.16■□□□□ 0.66
SH3PXD2A-203ENST00000369774 HNRNPUL2Q1KMD3 747 aaKnown RBP19.16■□□□□ 0.66
SH3PXD2A-203ENST00000369774 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
SH3PXD2A-203ENST00000369774 ITGAEP38570 1179 aa19.11■□□□□ 0.65
SH3PXD2A-203ENST00000369774 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.64
SH3PXD2A-203ENST00000369774 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
SH3PXD2A-203ENST00000369774 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
SH3PXD2A-203ENST00000369774 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
SH3PXD2A-203ENST00000369774 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
SH3PXD2A-203ENST00000369774 HRCP23327 699 aa18.65■□□□□ 0.58
SH3PXD2A-203ENST00000369774 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
SH3PXD2A-203ENST00000369774 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
SH3PXD2A-203ENST00000369774 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
SH3PXD2A-203ENST00000369774 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
SH3PXD2A-203ENST00000369774 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
SH3PXD2A-203ENST00000369774 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
SH3PXD2A-203ENST00000369774 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
SH3PXD2A-203ENST00000369774 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
SH3PXD2A-203ENST00000369774 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
SH3PXD2A-203ENST00000369774 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
SH3PXD2A-203ENST00000369774 BCANQ96GW7 911 aa18.33■□□□□ 0.52
SH3PXD2A-203ENST00000369774 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.52
SH3PXD2A-203ENST00000369774 FBLN2P98095 1184 aa18.22■□□□□ 0.51
SH3PXD2A-203ENST00000369774 ANP32CO43423 234 aa18.21■□□□□ 0.51
SH3PXD2A-203ENST00000369774 NEFMP07197 916 aa18.2■□□□□ 0.5
SH3PXD2A-203ENST00000369774 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
SH3PXD2A-203ENST00000369774 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.494e-6■□□□□ 9.3
SH3PXD2A-203ENST00000369774 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
SH3PXD2A-203ENST00000369774 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
SH3PXD2A-203ENST00000369774 GTF3C3Q9Y5Q9 886 aa17.97■□□□□ 0.47
SH3PXD2A-203ENST00000369774 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
SH3PXD2A-203ENST00000369774 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
SH3PXD2A-203ENST00000369774 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
SH3PXD2A-203ENST00000369774 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
SH3PXD2A-203ENST00000369774 ZNF777Q9ULD5 760 aaPredicted RBP17.91■□□□□ 0.46
SH3PXD2A-203ENST00000369774 ABCC9O60706 1549 aa17.9■□□□□ 0.46
SH3PXD2A-203ENST00000369774 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
SH3PXD2A-203ENST00000369774 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
SH3PXD2A-203ENST00000369774 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
SH3PXD2A-203ENST00000369774 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
SH3PXD2A-203ENST00000369774 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
SH3PXD2A-203ENST00000369774 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SH3PXD2A-203ENST00000369774 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
SH3PXD2A-203ENST00000369774 SALL2Q9Y467 1007 aaPredicted RBP17.67■□□□□ 0.42
SH3PXD2A-203ENST00000369774 A0A0G2JS52 829 aa17.66■□□□□ 0.42
SH3PXD2A-203ENST00000369774 NPM1P06748 294 aaKnown RBP eCLIP17.62■□□□□ 0.41
SH3PXD2A-203ENST00000369774 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
SH3PXD2A-203ENST00000369774 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
SH3PXD2A-203ENST00000369774 FKBP8Q14318 412 aa17.59■□□□□ 0.41
SH3PXD2A-203ENST00000369774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■□□□ 14.3
SH3PXD2A-203ENST00000369774 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■□□□ 12.3
SH3PXD2A-203ENST00000369774 ARXQ96QS3 562 aa17.56■□□□□ 0.4
SH3PXD2A-203ENST00000369774 CDK11BP21127 795 aaKnown RBP17.54■□□□□ 0.4
SH3PXD2A-203ENST00000369774 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
SH3PXD2A-203ENST00000369774 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
SH3PXD2A-203ENST00000369774 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.4
SH3PXD2A-203ENST00000369774 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
SH3PXD2A-203ENST00000369774 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
SH3PXD2A-203ENST00000369774 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
SH3PXD2A-203ENST00000369774 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
SH3PXD2A-203ENST00000369774 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
SH3PXD2A-203ENST00000369774 NBR1Q14596 966 aa17.47■□□□□ 0.39
SH3PXD2A-203ENST00000369774 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
SH3PXD2A-203ENST00000369774 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
SH3PXD2A-203ENST00000369774 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
SH3PXD2A-203ENST00000369774 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
SH3PXD2A-203ENST00000369774 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
SH3PXD2A-203ENST00000369774 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
SH3PXD2A-203ENST00000369774 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
SH3PXD2A-203ENST00000369774 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
SH3PXD2A-203ENST00000369774 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
SH3PXD2A-203ENST00000369774 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
SH3PXD2A-203ENST00000369774 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
SH3PXD2A-203ENST00000369774 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
SH3PXD2A-203ENST00000369774 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms