RNA–Protein interactions for RNA: ENST00000498462.1

RPL3-218, Transcript of ribosomal protein L3, humanhuman

TSL 3

Gene RPL3, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-218ENST00000498462 NISCHQ9Y2I1 1504 aa46.78■■■■■ 5.08
RPL3-218ENST00000498462 ABCC9O60706 1549 aa42.18■■■■■ 4.34
RPL3-218ENST00000498462 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
RPL3-218ENST00000498462 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
RPL3-218ENST00000498462 NACADO15069 1562 aa39.75■■■■□ 3.95
RPL3-218ENST00000498462 DCAF8L2P0C7V8 631 aa39.73■■■■□ 3.95
RPL3-218ENST00000498462 DNAJC5BQ9UF47 199 aa39.65■■■■□ 3.94
RPL3-218ENST00000498462 PABPN1Q86U42 306 aaKnown RBP eCLIP39.31■■■■□ 3.88
RPL3-218ENST00000498462 MYO15BQ96JP2 1530 aa39.12■■■■□ 3.85
RPL3-218ENST00000498462 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
RPL3-218ENST00000498462 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
RPL3-218ENST00000498462 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
RPL3-218ENST00000498462 DCAF1Q9Y4B6 1507 aa38.58■■■■□ 3.77
RPL3-218ENST00000498462 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
RPL3-218ENST00000498462 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
RPL3-218ENST00000498462 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
RPL3-218ENST00000498462 CECR2Q9BXF3 1484 aa38■■■■□ 3.67
RPL3-218ENST00000498462 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
RPL3-218ENST00000498462 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
RPL3-218ENST00000498462 ATAD2BQ9ULI0 1458 aa36.59■■■■□ 3.45
RPL3-218ENST00000498462 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
RPL3-218ENST00000498462 SMARCA4P51532 1647 aa36.49■■■■□ 3.43
RPL3-218ENST00000498462 SMARCA2P51531 1590 aa36.48■■■■□ 3.43
RPL3-218ENST00000498462 ERCC6Q03468 1493 aa36.46■■■■□ 3.43
RPL3-218ENST00000498462 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
RPL3-218ENST00000498462 CUX2O14529 1486 aa36.36■■■■□ 3.41
RPL3-218ENST00000498462 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
RPL3-218ENST00000498462 BAZ1BQ9UIG0 1483 aaKnown RBP36.25■■■■□ 3.39
RPL3-218ENST00000498462 NESP48681 1621 aa36.18■■■■□ 3.38
RPL3-218ENST00000498462 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
RPL3-218ENST00000498462 MROH2BQ7Z745 1585 aa36.05■■■■□ 3.36
RPL3-218ENST00000498462 LAMC3Q9Y6N6 1575 aa35.87■■■■□ 3.33
RPL3-218ENST00000498462 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
RPL3-218ENST00000498462 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
RPL3-218ENST00000498462 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
RPL3-218ENST00000498462 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
RPL3-218ENST00000498462 WIZO95785 1651 aa35.59■■■■□ 3.29
RPL3-218ENST00000498462 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
RPL3-218ENST00000498462 WDR62O43379 1518 aa35.28■■■■□ 3.24
RPL3-218ENST00000498462 RSF1Q96T23 1441 aaPredicted RBP35.28■■■■□ 3.24
RPL3-218ENST00000498462 CEP164Q9UPV0 1460 aa35.25■■■■□ 3.23
RPL3-218ENST00000498462 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
RPL3-218ENST00000498462 CFTRP13569 1480 aa35.16■■■■□ 3.22
RPL3-218ENST00000498462 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
RPL3-218ENST00000498462 TRIM41Q8WV44 630 aa34.95■■■■□ 3.19
RPL3-218ENST00000498462 URB2Q14146 1524 aaKnown RBP34.9■■■■□ 3.18
RPL3-218ENST00000498462 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
RPL3-218ENST00000498462 OSCARQ8IYS5 282 aa34.78■■■■□ 3.16
RPL3-218ENST00000498462 PRDM2Q13029 1718 aa34.71■■■■□ 3.15
RPL3-218ENST00000498462 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
RPL3-218ENST00000498462 TOPBP1Q92547 1522 aa34.52■■■■□ 3.12
RPL3-218ENST00000498462 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
RPL3-218ENST00000498462 ABCC8Q09428 1581 aa34.45■■■■□ 3.11
RPL3-218ENST00000498462 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
RPL3-218ENST00000498462 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
RPL3-218ENST00000498462 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
RPL3-218ENST00000498462 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
RPL3-218ENST00000498462 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
RPL3-218ENST00000498462 AQRO60306 1485 aaKnown RBP eCLIP34.21■■■■□ 3.071e-12■■■■□ 26.7
RPL3-218ENST00000498462 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
RPL3-218ENST00000498462 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
RPL3-218ENST00000498462 ARHGEF11O15085 1522 aa34.13■■■■□ 3.05
RPL3-218ENST00000498462 FBLN2P98095 1184 aa34.11■■■■□ 3.05
RPL3-218ENST00000498462 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
RPL3-218ENST00000498462 SOGA1O94964 1423 aa34.05■■■■□ 3.04
RPL3-218ENST00000498462 CHD1O14646 1710 aa34.02■■■■□ 3.04
RPL3-218ENST00000498462 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
RPL3-218ENST00000498462 CYB5RLQ6IPT4 315 aa34■■■■□ 3.03
RPL3-218ENST00000498462 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
RPL3-218ENST00000498462 CUX1P39880 1505 aa33.87■■■■□ 3.01
RPL3-218ENST00000498462 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
RPL3-218ENST00000498462 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
RPL3-218ENST00000498462 WDR97A6NE52 1622 aa33.8■■■■□ 3
RPL3-218ENST00000498462 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
RPL3-218ENST00000498462 ARAP1Q96P48 1450 aa33.78■■■■□ 3
RPL3-218ENST00000498462 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
RPL3-218ENST00000498462 MAGI1Q96QZ7 1491 aaPredicted RBP33.73■■■□□ 2.99
RPL3-218ENST00000498462 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
RPL3-218ENST00000498462 SYNJ1O43426 1573 aa33.65■■■□□ 2.98
RPL3-218ENST00000498462 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
RPL3-218ENST00000498462 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
RPL3-218ENST00000498462 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
RPL3-218ENST00000498462 ABCA10Q8WWZ4 1543 aa33.53■■■□□ 2.96
RPL3-218ENST00000498462 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
RPL3-218ENST00000498462 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
RPL3-218ENST00000498462 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.945e-6■□□□□ 8.4
RPL3-218ENST00000498462 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
RPL3-218ENST00000498462 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
RPL3-218ENST00000498462 BIVM-ERCC5R4GMW8 1640 aa33.26■■■□□ 2.91
RPL3-218ENST00000498462 ADAMTS12P58397 1594 aa33.22■■■□□ 2.91
RPL3-218ENST00000498462 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
RPL3-218ENST00000498462 NUP160Q12769 1436 aa33.17■■■□□ 2.9
RPL3-218ENST00000498462 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
RPL3-218ENST00000498462 ERCC6L2Q5T890 1561 aa33.13■■■□□ 2.89
RPL3-218ENST00000498462 ERICH3Q5RHP9 1530 aa33.1■■■□□ 2.89
RPL3-218ENST00000498462 SHROOM2Q13796 1616 aa32.98■■■□□ 2.87
RPL3-218ENST00000498462 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
RPL3-218ENST00000498462 PRG4Q92954 1404 aaPredicted RBP32.92■■■□□ 2.86
RPL3-218ENST00000498462 AEBP2Q6ZN18 517 aaPredicted RBP32.8■■■□□ 2.84
RPL3-218ENST00000498462 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms