RNA–Protein interactions for RNA: ENST00000368636.8

BNIP3-201, Transcript of BCL2 interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BNIP3, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-201ENST00000368636 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
BNIP3-201ENST00000368636 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
BNIP3-201ENST00000368636 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
BNIP3-201ENST00000368636 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
BNIP3-201ENST00000368636 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
BNIP3-201ENST00000368636 ABCC9O60706 1549 aa24.54■■□□□ 1.52
BNIP3-201ENST00000368636 HRCP23327 699 aa24.48■■□□□ 1.51
BNIP3-201ENST00000368636 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
BNIP3-201ENST00000368636 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
BNIP3-201ENST00000368636 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
BNIP3-201ENST00000368636 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
BNIP3-201ENST00000368636 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
BNIP3-201ENST00000368636 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
BNIP3-201ENST00000368636 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
BNIP3-201ENST00000368636 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
BNIP3-201ENST00000368636 NACADO15069 1562 aa23.53■■□□□ 1.36
BNIP3-201ENST00000368636 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
BNIP3-201ENST00000368636 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.338e-6■□□□□ 8.9
BNIP3-201ENST00000368636 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
BNIP3-201ENST00000368636 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
BNIP3-201ENST00000368636 EHMT2Q96KQ7 1210 aa23.17■■□□□ 1.3
BNIP3-201ENST00000368636 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
BNIP3-201ENST00000368636 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
BNIP3-201ENST00000368636 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
BNIP3-201ENST00000368636 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.27
BNIP3-201ENST00000368636 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
BNIP3-201ENST00000368636 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
BNIP3-201ENST00000368636 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
BNIP3-201ENST00000368636 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
BNIP3-201ENST00000368636 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
BNIP3-201ENST00000368636 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
BNIP3-201ENST00000368636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
BNIP3-201ENST00000368636 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
BNIP3-201ENST00000368636 TTBK1Q5TCY1 1321 aaPredicted RBP22.52■■□□□ 1.2
BNIP3-201ENST00000368636 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
BNIP3-201ENST00000368636 WIZO95785 1651 aa22.5■■□□□ 1.19
BNIP3-201ENST00000368636 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
BNIP3-201ENST00000368636 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
BNIP3-201ENST00000368636 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
BNIP3-201ENST00000368636 DIEXFQ68CQ4 756 aaKnown RBP22.35■■□□□ 1.17
BNIP3-201ENST00000368636 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
BNIP3-201ENST00000368636 CENPBP07199 599 aaPredicted RBP22.2■■□□□ 1.14
BNIP3-201ENST00000368636 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
BNIP3-201ENST00000368636 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
BNIP3-201ENST00000368636 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
BNIP3-201ENST00000368636 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
BNIP3-201ENST00000368636 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
BNIP3-201ENST00000368636 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
BNIP3-201ENST00000368636 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
BNIP3-201ENST00000368636 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
BNIP3-201ENST00000368636 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
BNIP3-201ENST00000368636 MIER1Q8N108 512 aa21.89■■□□□ 1.09
BNIP3-201ENST00000368636 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
BNIP3-201ENST00000368636 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
BNIP3-201ENST00000368636 MYT1Q01538 1121 aa21.83■■□□□ 1.09
BNIP3-201ENST00000368636 HNRNPUL2Q1KMD3 747 aaKnown RBP21.76■■□□□ 1.07
BNIP3-201ENST00000368636 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
BNIP3-201ENST00000368636 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
BNIP3-201ENST00000368636 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
BNIP3-201ENST00000368636 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
BNIP3-201ENST00000368636 SOGA1O94964 1423 aa21.62■■□□□ 1.05
BNIP3-201ENST00000368636 RANGAP1P46060 587 aaPredicted RBP21.54■■□□□ 1.04
BNIP3-201ENST00000368636 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
BNIP3-201ENST00000368636 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
BNIP3-201ENST00000368636 NESP48681 1621 aa21.52■■□□□ 1.04
BNIP3-201ENST00000368636 CSRNP3Q8WYN3 585 aa21.46■■□□□ 1.03
BNIP3-201ENST00000368636 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
BNIP3-201ENST00000368636 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
BNIP3-201ENST00000368636 CFTRP13569 1480 aa21.41■■□□□ 1.02
BNIP3-201ENST00000368636 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.01
BNIP3-201ENST00000368636 SYNJ1O43426 1573 aa21.3■■□□□ 1
BNIP3-201ENST00000368636 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
BNIP3-201ENST00000368636 BCANQ96GW7 911 aa21.24■□□□□ 0.99
BNIP3-201ENST00000368636 KCNH8Q96L42 1107 aa21.23■□□□□ 0.99
BNIP3-201ENST00000368636 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
BNIP3-201ENST00000368636 APLP2Q06481 763 aa21.18■□□□□ 0.98
BNIP3-201ENST00000368636 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
BNIP3-201ENST00000368636 CUX1P39880 1505 aa21.17■□□□□ 0.98
BNIP3-201ENST00000368636 CLIP1P30622 1438 aa21.13■□□□□ 0.97
BNIP3-201ENST00000368636 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
BNIP3-201ENST00000368636 ITGAEP38570 1179 aa21.05■□□□□ 0.96
BNIP3-201ENST00000368636 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
BNIP3-201ENST00000368636 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
BNIP3-201ENST00000368636 EEA1Q15075 1411 aa21.03■□□□□ 0.96
BNIP3-201ENST00000368636 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
BNIP3-201ENST00000368636 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
BNIP3-201ENST00000368636 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
BNIP3-201ENST00000368636 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
BNIP3-201ENST00000368636 BCL11AQ9H165 835 aa21■□□□□ 0.95
BNIP3-201ENST00000368636 VPS8Q8N3P4 1428 aa21■□□□□ 0.95
BNIP3-201ENST00000368636 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
BNIP3-201ENST00000368636 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
BNIP3-201ENST00000368636 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
BNIP3-201ENST00000368636 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
BNIP3-201ENST00000368636 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
BNIP3-201ENST00000368636 FKBP8Q14318 412 aa20.95■□□□□ 0.94
BNIP3-201ENST00000368636 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
BNIP3-201ENST00000368636 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
BNIP3-201ENST00000368636 CUX2O14529 1486 aa20.91■□□□□ 0.94
BNIP3-201ENST00000368636 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms