RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
PTMA-201ENST00000341369 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
PTMA-201ENST00000341369 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
PTMA-201ENST00000341369 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
PTMA-201ENST00000341369 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
PTMA-201ENST00000341369 FOXD1Q16676 465 aa24.27■■□□□ 1.48
PTMA-201ENST00000341369 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
PTMA-201ENST00000341369 ABCC9O60706 1549 aa23.42■■□□□ 1.34
PTMA-201ENST00000341369 MSH5O43196 834 aa23.07■■□□□ 1.28
PTMA-201ENST00000341369 CCDC180Q9P1Z9 1646 aa23.02■■□□□ 1.28
PTMA-201ENST00000341369 PIAS4Q8N2W9 510 aaPredicted RBP22.5■■□□□ 1.19
PTMA-201ENST00000341369 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
PTMA-201ENST00000341369 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
PTMA-201ENST00000341369 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
PTMA-201ENST00000341369 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
PTMA-201ENST00000341369 ADRA2BP18089 450 aa21.97■■□□□ 1.11
PTMA-201ENST00000341369 NACADO15069 1562 aa21.89■■□□□ 1.09
PTMA-201ENST00000341369 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTMA-201ENST00000341369 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
PTMA-201ENST00000341369 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
PTMA-201ENST00000341369 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
PTMA-201ENST00000341369 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
PTMA-201ENST00000341369 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
PTMA-201ENST00000341369 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
PTMA-201ENST00000341369 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
PTMA-201ENST00000341369 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.96
PTMA-201ENST00000341369 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
PTMA-201ENST00000341369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
PTMA-201ENST00000341369 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
PTMA-201ENST00000341369 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
PTMA-201ENST00000341369 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
PTMA-201ENST00000341369 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
PTMA-201ENST00000341369 CUX2O14529 1486 aa20.38■□□□□ 0.85
PTMA-201ENST00000341369 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
PTMA-201ENST00000341369 CACNB1Q02641 598 aaPredicted RBP20.22■□□□□ 0.83
PTMA-201ENST00000341369 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
PTMA-201ENST00000341369 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
PTMA-201ENST00000341369 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
PTMA-201ENST00000341369 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
PTMA-201ENST00000341369 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
PTMA-201ENST00000341369 NESP48681 1621 aa19.97■□□□□ 0.79
PTMA-201ENST00000341369 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
PTMA-201ENST00000341369 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
PTMA-201ENST00000341369 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
PTMA-201ENST00000341369 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
PTMA-201ENST00000341369 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
PTMA-201ENST00000341369 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
PTMA-201ENST00000341369 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
PTMA-201ENST00000341369 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
PTMA-201ENST00000341369 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
PTMA-201ENST00000341369 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
PTMA-201ENST00000341369 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
PTMA-201ENST00000341369 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
PTMA-201ENST00000341369 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
PTMA-201ENST00000341369 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
PTMA-201ENST00000341369 WDR62O43379 1518 aa19.51■□□□□ 0.71
PTMA-201ENST00000341369 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
PTMA-201ENST00000341369 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
PTMA-201ENST00000341369 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
PTMA-201ENST00000341369 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PTMA-201ENST00000341369 WIZO95785 1651 aa19.31■□□□□ 0.68
PTMA-201ENST00000341369 C1QBPQ07021 282 aaKnown RBP19.29■□□□□ 0.68
PTMA-201ENST00000341369 CFTRP13569 1480 aa19.26■□□□□ 0.67
PTMA-201ENST00000341369 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
PTMA-201ENST00000341369 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
PTMA-201ENST00000341369 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
PTMA-201ENST00000341369 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
PTMA-201ENST00000341369 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
PTMA-201ENST00000341369 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
PTMA-201ENST00000341369 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
PTMA-201ENST00000341369 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
PTMA-201ENST00000341369 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
PTMA-201ENST00000341369 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
PTMA-201ENST00000341369 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
PTMA-201ENST00000341369 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
PTMA-201ENST00000341369 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
PTMA-201ENST00000341369 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
PTMA-201ENST00000341369 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
PTMA-201ENST00000341369 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
PTMA-201ENST00000341369 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
PTMA-201ENST00000341369 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.62
PTMA-201ENST00000341369 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
PTMA-201ENST00000341369 FBLN2P98095 1184 aa18.83■□□□□ 0.6
PTMA-201ENST00000341369 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
PTMA-201ENST00000341369 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
PTMA-201ENST00000341369 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.64e-20■■■■■ 37.2
PTMA-201ENST00000341369 CHD1O14646 1710 aa18.8■□□□□ 0.6
PTMA-201ENST00000341369 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
PTMA-201ENST00000341369 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
PTMA-201ENST00000341369 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
PTMA-201ENST00000341369 SOGA1O94964 1423 aa18.65■□□□□ 0.58
PTMA-201ENST00000341369 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
PTMA-201ENST00000341369 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
PTMA-201ENST00000341369 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
PTMA-201ENST00000341369 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
PTMA-201ENST00000341369 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
PTMA-201ENST00000341369 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
PTMA-201ENST00000341369 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
PTMA-201ENST00000341369 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
PTMA-201ENST00000341369 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms