RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-216ENST00000539770 NISCHQ9Y2I1 1504 aa54.56■■■■■ 6.32
ARL6IP4-216ENST00000539770 CCDC180Q9P1Z9 1646 aa48.64■■■■■ 5.38
ARL6IP4-216ENST00000539770 ABCC9O60706 1549 aa47.72■■■■■ 5.23
ARL6IP4-216ENST00000539770 RB1CC1Q8TDY2 1594 aa45.85■■■■■ 4.93
ARL6IP4-216ENST00000539770 NACADO15069 1562 aa45.75■■■■■ 4.92
ARL6IP4-216ENST00000539770 DCAF8L2P0C7V8 631 aa45.52■■■■■ 4.88
ARL6IP4-216ENST00000539770 ZCCHC6Q5VYS8 1495 aaKnown RBP45.45■■■■■ 4.87
ARL6IP4-216ENST00000539770 MYO15BQ96JP2 1530 aa45.43■■■■■ 4.86
ARL6IP4-216ENST00000539770 DCAF1Q9Y4B6 1507 aa45.16■■■■■ 4.82
ARL6IP4-216ENST00000539770 DNAJC5BQ9UF47 199 aa45.15■■■■■ 4.82
ARL6IP4-216ENST00000539770 UNC13AQ9UPW8 1703 aa44.77■■■■■ 4.76
ARL6IP4-216ENST00000539770 PABPN1Q86U42 306 aaKnown RBP eCLIP44.5■■■■■ 4.717e-8■■■■□ 20.2
ARL6IP4-216ENST00000539770 BICRAQ9NZM4 1560 aa44.46■■■■■ 4.71
ARL6IP4-216ENST00000539770 SCRIBQ14160 1630 aa44.35■■■■■ 4.69
ARL6IP4-216ENST00000539770 SHROOM4Q9ULL8 1493 aa44.06■■■■■ 4.64
ARL6IP4-216ENST00000539770 EIF4G1Q04637 1599 aaKnown RBP43.32■■■■■ 4.52
ARL6IP4-216ENST00000539770 CC2D2AQ9P2K1 1620 aa43.17■■■■■ 4.5
ARL6IP4-216ENST00000539770 CECR2Q9BXF3 1484 aa43.06■■■■■ 4.48
ARL6IP4-216ENST00000539770 SMARCA4P51532 1647 aa42.4■■■■■ 4.38
ARL6IP4-216ENST00000539770 BAZ1AQ9NRL2 1556 aaPredicted RBP42.33■■■■■ 4.37
ARL6IP4-216ENST00000539770 NCAPD3P42695 1498 aa42.19■■■■■ 4.34
ARL6IP4-216ENST00000539770 ATAD2BQ9ULI0 1458 aa42.19■■■■■ 4.34
ARL6IP4-216ENST00000539770 SMARCA2P51531 1590 aa42.17■■■■■ 4.34
ARL6IP4-216ENST00000539770 MROH2BQ7Z745 1585 aa42.04■■■■■ 4.32
ARL6IP4-216ENST00000539770 HMGXB3Q12766 1538 aa42.03■■■■■ 4.32
ARL6IP4-216ENST00000539770 PEG3Q9GZU2 1588 aa42■■■■■ 4.31
ARL6IP4-216ENST00000539770 DNAJC5Q9H3Z4 198 aa41.99■■■■■ 4.31
ARL6IP4-216ENST00000539770 BAZ1BQ9UIG0 1483 aaKnown RBP41.85■■■■■ 4.29
ARL6IP4-216ENST00000539770 WIZO95785 1651 aa41.56■■■■■ 4.24
ARL6IP4-216ENST00000539770 CUX2O14529 1486 aa41.49■■■■■ 4.23
ARL6IP4-216ENST00000539770 RSF1Q96T23 1441 aaPredicted RBP41.48■■■■■ 4.23
ARL6IP4-216ENST00000539770 NESP48681 1621 aa41.23■■■■■ 4.19
ARL6IP4-216ENST00000539770 ERCC6Q03468 1493 aa41.22■■■■■ 4.19
ARL6IP4-216ENST00000539770 TOP2AP11388 1531 aaKnown RBP41.17■■■■■ 4.18
ARL6IP4-216ENST00000539770 LAMC3Q9Y6N6 1575 aa41.14■■■■■ 4.18
ARL6IP4-216ENST00000539770 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
ARL6IP4-216ENST00000539770 PDS5BQ9NTI5 1447 aa40.84■■■■■ 4.13
ARL6IP4-216ENST00000539770 KIF21AQ7Z4S6 1674 aa40.76■■■■■ 4.12
ARL6IP4-216ENST00000539770 THOC2Q8NI27 1593 aaKnown RBP40.72■■■■■ 4.11
ARL6IP4-216ENST00000539770 CFTRP13569 1480 aa40.69■■■■■ 4.1
ARL6IP4-216ENST00000539770 CCDC88BA6NC98 1476 aa40.62■■■■■ 4.09
ARL6IP4-216ENST00000539770 FANCD2Q9BXW9 1451 aa40.51■■■■■ 4.07
ARL6IP4-216ENST00000539770 CEP164Q9UPV0 1460 aa40.49■■■■■ 4.07
ARL6IP4-216ENST00000539770 MRC2Q9UBG0 1479 aa40.47■■■■■ 4.07
ARL6IP4-216ENST00000539770 PRDM2Q13029 1718 aa40.37■■■■■ 4.05
ARL6IP4-216ENST00000539770 WDR62O43379 1518 aa40.37■■■■■ 4.05
ARL6IP4-216ENST00000539770 SUPT5HO00267 1087 aaKnown RBP40.2■■■■■ 4.03
ARL6IP4-216ENST00000539770 URB2Q14146 1524 aaKnown RBP40.11■■■■■ 4.01
ARL6IP4-216ENST00000539770 TOPBP1Q92547 1522 aa39.84■■■■□ 3.97
ARL6IP4-216ENST00000539770 ABCC8Q09428 1581 aa39.8■■■■□ 3.96
ARL6IP4-216ENST00000539770 DNMBPQ6XZF7 1577 aa39.8■■■■□ 3.96
ARL6IP4-216ENST00000539770 TRIM41Q8WV44 630 aa39.73■■■■□ 3.95
ARL6IP4-216ENST00000539770 IFT140Q96RY7 1462 aa39.64■■■■□ 3.94
ARL6IP4-216ENST00000539770 POLA1P09884 1462 aaPredicted RBP39.49■■■■□ 3.91
ARL6IP4-216ENST00000539770 CUX1P39880 1505 aa39.46■■■■□ 3.91
ARL6IP4-216ENST00000539770 ZNF608Q9ULD9 1512 aaPredicted RBP39.46■■■■□ 3.91
ARL6IP4-216ENST00000539770 TARBP1Q13395 1621 aaKnown RBP39.42■■■■□ 3.9
ARL6IP4-216ENST00000539770 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
ARL6IP4-216ENST00000539770 EIF4G3O43432 1585 aaKnown RBP39.34■■■■□ 3.89
ARL6IP4-216ENST00000539770 OSCARQ8IYS5 282 aa39.33■■■■□ 3.89
ARL6IP4-216ENST00000539770 RAD54L2Q9Y4B4 1467 aa39.28■■■■□ 3.88
ARL6IP4-216ENST00000539770 SOGA1O94964 1423 aa39.27■■■■□ 3.88
ARL6IP4-216ENST00000539770 AQRO60306 1485 aaKnown RBP eCLIP39.17■■■■□ 3.864e-7■■■■■ 38.3
ARL6IP4-216ENST00000539770 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
ARL6IP4-216ENST00000539770 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
ARL6IP4-216ENST00000539770 BIVM-ERCC5R4GMW8 1640 aa39.09■■■■□ 3.85
ARL6IP4-216ENST00000539770 TOP2BQ02880 1626 aa39.08■■■■□ 3.85
ARL6IP4-216ENST00000539770 TDRD9Q8NDG6 1382 aaKnown RBP39.08■■■■□ 3.85
ARL6IP4-216ENST00000539770 SYNJ1O43426 1573 aa39.06■■■■□ 3.84
ARL6IP4-216ENST00000539770 ABCA10Q8WWZ4 1543 aa38.98■■■■□ 3.83
ARL6IP4-216ENST00000539770 RIMBP3CA6NJZ7 1639 aa38.96■■■■□ 3.83
ARL6IP4-216ENST00000539770 RIMBP3BA6NNM3 1639 aa38.96■■■■□ 3.83
ARL6IP4-216ENST00000539770 RIMBP3Q9UFD9 1639 aa38.96■■■■□ 3.83
ARL6IP4-216ENST00000539770 GRIN2BQ13224 1484 aa38.89■■■■□ 3.82
ARL6IP4-216ENST00000539770 SNAPC4Q5SXM2 1469 aa38.87■■■■□ 3.81
ARL6IP4-216ENST00000539770 ABCA5Q8WWZ7 1642 aa38.87■■■■□ 3.81
ARL6IP4-216ENST00000539770 GAPVD1Q14C86 1478 aa38.85■■■■□ 3.81
ARL6IP4-216ENST00000539770 CHD1O14646 1710 aa38.84■■■■□ 3.81
ARL6IP4-216ENST00000539770 MAGI1Q96QZ7 1491 aaPredicted RBP38.82■■■■□ 3.81
ARL6IP4-216ENST00000539770 PBRM1Q86U86 1689 aa38.81■■■■□ 3.8
ARL6IP4-216ENST00000539770 ARHGEF11O15085 1522 aa38.79■■■■□ 3.8
ARL6IP4-216ENST00000539770 FBLN2P98095 1184 aa38.71■■■■□ 3.79
ARL6IP4-216ENST00000539770 SYNJ2O15056 1496 aa38.66■■■■□ 3.78
ARL6IP4-216ENST00000539770 CHMP7Q8WUX9 453 aaPredicted RBP38.59■■■■□ 3.77
ARL6IP4-216ENST00000539770 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
ARL6IP4-216ENST00000539770 ERICH3Q5RHP9 1530 aa38.52■■■■□ 3.76
ARL6IP4-216ENST00000539770 CLASP1Q7Z460 1538 aa38.46■■■■□ 3.75
ARL6IP4-216ENST00000539770 FHAD1B1AJZ9 1412 aa38.4■■■■□ 3.74
ARL6IP4-216ENST00000539770 GRIN2AQ12879 1464 aa38.39■■■■□ 3.74
ARL6IP4-216ENST00000539770 CYB5RLQ6IPT4 315 aa38.37■■■■□ 3.73
ARL6IP4-216ENST00000539770 ARAP1Q96P48 1450 aa38.35■■■■□ 3.73
ARL6IP4-216ENST00000539770 KIF27Q86VH2 1401 aa38.32■■■■□ 3.73
ARL6IP4-216ENST00000539770 NUP160Q12769 1436 aa38.23■■■■□ 3.71
ARL6IP4-216ENST00000539770 CEP170Q5SW79 1584 aa38.22■■■■□ 3.71
ARL6IP4-216ENST00000539770 IGF1RP08069 1367 aa38.15■■■■□ 3.7
ARL6IP4-216ENST00000539770 CUL7Q14999 1698 aa38.14■■■■□ 3.7
ARL6IP4-216ENST00000539770 TRHP20396 242 aaPredicted RBP38.09■■■■□ 3.69
ARL6IP4-216ENST00000539770 SHROOM2Q13796 1616 aa37.98■■■■□ 3.67
ARL6IP4-216ENST00000539770 RUSC2Q8N2Y8 1516 aa37.97■■■■□ 3.67
ARL6IP4-216ENST00000539770 CARMIL1Q5VZK9 1371 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms