RNA–Protein interactions for RNA: ENST00000420536.1

RPL3-204, Transcript of ribosomal protein L3, humanhuman

TSL 5

Gene RPL3, Length 711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-204ENST00000420536 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
RPL3-204ENST00000420536 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
RPL3-204ENST00000420536 ABCC9O60706 1549 aa19.78■□□□□ 0.76
RPL3-204ENST00000420536 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
RPL3-204ENST00000420536 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
RPL3-204ENST00000420536 NACADO15069 1562 aa18.88■□□□□ 0.61
RPL3-204ENST00000420536 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
RPL3-204ENST00000420536 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
RPL3-204ENST00000420536 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
RPL3-204ENST00000420536 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPL3-204ENST00000420536 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
RPL3-204ENST00000420536 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
RPL3-204ENST00000420536 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
RPL3-204ENST00000420536 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
RPL3-204ENST00000420536 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
RPL3-204ENST00000420536 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
RPL3-204ENST00000420536 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
RPL3-204ENST00000420536 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
RPL3-204ENST00000420536 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
RPL3-204ENST00000420536 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
RPL3-204ENST00000420536 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
RPL3-204ENST00000420536 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
RPL3-204ENST00000420536 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
RPL3-204ENST00000420536 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
RPL3-204ENST00000420536 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
RPL3-204ENST00000420536 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
RPL3-204ENST00000420536 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
RPL3-204ENST00000420536 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
RPL3-204ENST00000420536 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
RPL3-204ENST00000420536 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
RPL3-204ENST00000420536 NESP48681 1621 aa17.02■□□□□ 0.31
RPL3-204ENST00000420536 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
RPL3-204ENST00000420536 WIZO95785 1651 aa16.99■□□□□ 0.31
RPL3-204ENST00000420536 CUX2O14529 1486 aa16.99■□□□□ 0.31
RPL3-204ENST00000420536 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
RPL3-204ENST00000420536 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
RPL3-204ENST00000420536 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
RPL3-204ENST00000420536 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
RPL3-204ENST00000420536 CFTRP13569 1480 aa16.77■□□□□ 0.28
RPL3-204ENST00000420536 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
RPL3-204ENST00000420536 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
RPL3-204ENST00000420536 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
RPL3-204ENST00000420536 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
RPL3-204ENST00000420536 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
RPL3-204ENST00000420536 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
RPL3-204ENST00000420536 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
RPL3-204ENST00000420536 WDR62O43379 1518 aa16.64■□□□□ 0.25
RPL3-204ENST00000420536 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
RPL3-204ENST00000420536 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
RPL3-204ENST00000420536 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
RPL3-204ENST00000420536 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
RPL3-204ENST00000420536 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
RPL3-204ENST00000420536 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
RPL3-204ENST00000420536 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
RPL3-204ENST00000420536 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
RPL3-204ENST00000420536 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
RPL3-204ENST00000420536 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
RPL3-204ENST00000420536 SOGA1O94964 1423 aa16.25■□□□□ 0.19
RPL3-204ENST00000420536 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.197e-9■■■■■ 32.2
RPL3-204ENST00000420536 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
RPL3-204ENST00000420536 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
RPL3-204ENST00000420536 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
RPL3-204ENST00000420536 CUX1P39880 1505 aa16.18■□□□□ 0.18
RPL3-204ENST00000420536 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
RPL3-204ENST00000420536 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
RPL3-204ENST00000420536 FBLN2P98095 1184 aa16.15■□□□□ 0.18
RPL3-204ENST00000420536 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
RPL3-204ENST00000420536 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
RPL3-204ENST00000420536 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.175e-6■□□□□ 8.4
RPL3-204ENST00000420536 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
RPL3-204ENST00000420536 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
RPL3-204ENST00000420536 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
RPL3-204ENST00000420536 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
RPL3-204ENST00000420536 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
RPL3-204ENST00000420536 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
RPL3-204ENST00000420536 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
RPL3-204ENST00000420536 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
RPL3-204ENST00000420536 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
RPL3-204ENST00000420536 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
RPL3-204ENST00000420536 CHD1O14646 1710 aa15.94■□□□□ 0.14
RPL3-204ENST00000420536 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
RPL3-204ENST00000420536 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
RPL3-204ENST00000420536 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
RPL3-204ENST00000420536 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
RPL3-204ENST00000420536 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
RPL3-204ENST00000420536 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
RPL3-204ENST00000420536 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
RPL3-204ENST00000420536 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
RPL3-204ENST00000420536 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
RPL3-204ENST00000420536 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
RPL3-204ENST00000420536 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
RPL3-204ENST00000420536 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
RPL3-204ENST00000420536 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
RPL3-204ENST00000420536 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
RPL3-204ENST00000420536 NUP160Q12769 1436 aa15.77■□□□□ 0.11
RPL3-204ENST00000420536 IGF1RP08069 1367 aa15.74■□□□□ 0.11
RPL3-204ENST00000420536 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
RPL3-204ENST00000420536 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
RPL3-204ENST00000420536 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
RPL3-204ENST00000420536 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms