RNA–Protein interactions for RNA: ENST00000343067.8

EPB41-201, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-201ENST00000343067 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
EPB41-201ENST00000343067 MYT1Q01538 1121 aa13.8□□□□□ -0.2
EPB41-201ENST00000343067 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
EPB41-201ENST00000343067 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
EPB41-201ENST00000343067 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
EPB41-201ENST00000343067 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
EPB41-201ENST00000343067 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
EPB41-201ENST00000343067 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
EPB41-201ENST00000343067 ZCCHC6Q5VYS8 1495 aaKnown RBP12.62□□□□□ -0.39
EPB41-201ENST00000343067 CCDC180Q9P1Z9 1646 aa12.61□□□□□ -0.39
EPB41-201ENST00000343067 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.4
EPB41-201ENST00000343067 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
EPB41-201ENST00000343067 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
EPB41-201ENST00000343067 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
EPB41-201ENST00000343067 CCER1Q8TC90 406 aaPredicted RBP12.26□□□□□ -0.45
EPB41-201ENST00000343067 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
EPB41-201ENST00000343067 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
EPB41-201ENST00000343067 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
EPB41-201ENST00000343067 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.46
EPB41-201ENST00000343067 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
EPB41-201ENST00000343067 GLIPR1L2Q4G1C9 344 aa12.04□□□□□ -0.48
EPB41-201ENST00000343067 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.5
EPB41-201ENST00000343067 HRCP23327 699 aa11.93□□□□□ -0.5
EPB41-201ENST00000343067 ABCC9O60706 1549 aa11.92□□□□□ -0.5
EPB41-201ENST00000343067 CENPBP07199 599 aaPredicted RBP11.91□□□□□ -0.5
EPB41-201ENST00000343067 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
EPB41-201ENST00000343067 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
EPB41-201ENST00000343067 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
EPB41-201ENST00000343067 FAM9AQ8IZU1 332 aaPredicted RBP11.78□□□□□ -0.52
EPB41-201ENST00000343067 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.53
EPB41-201ENST00000343067 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
EPB41-201ENST00000343067 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
EPB41-201ENST00000343067 PPARGC1BQ86YN6 1023 aaKnown RBP11.63□□□□□ -0.55
EPB41-201ENST00000343067 NEFLP07196 543 aa11.63□□□□□ -0.55
EPB41-201ENST00000343067 NACADO15069 1562 aa11.61□□□□□ -0.55
EPB41-201ENST00000343067 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
EPB41-201ENST00000343067 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
EPB41-201ENST00000343067 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
EPB41-201ENST00000343067 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
EPB41-201ENST00000343067 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
EPB41-201ENST00000343067 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
EPB41-201ENST00000343067 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
EPB41-201ENST00000343067 WIZO95785 1651 aa11.49□□□□□ -0.57
EPB41-201ENST00000343067 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
EPB41-201ENST00000343067 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
EPB41-201ENST00000343067 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
EPB41-201ENST00000343067 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
EPB41-201ENST00000343067 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
EPB41-201ENST00000343067 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
EPB41-201ENST00000343067 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
EPB41-201ENST00000343067 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
EPB41-201ENST00000343067 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
EPB41-201ENST00000343067 ARID3AQ99856 593 aa11.35□□□□□ -0.59
EPB41-201ENST00000343067 HOMEZQ8IX15 550 aa11.34□□□□□ -0.59
EPB41-201ENST00000343067 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
EPB41-201ENST00000343067 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
EPB41-201ENST00000343067 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
EPB41-201ENST00000343067 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
EPB41-201ENST00000343067 SMARCA4P51532 1647 aa11.3□□□□□ -0.6
EPB41-201ENST00000343067 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
EPB41-201ENST00000343067 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
EPB41-201ENST00000343067 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
EPB41-201ENST00000343067 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
EPB41-201ENST00000343067 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
EPB41-201ENST00000343067 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
EPB41-201ENST00000343067 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
EPB41-201ENST00000343067 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
EPB41-201ENST00000343067 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.616e-6■■□□□ 13.8
EPB41-201ENST00000343067 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.62
EPB41-201ENST00000343067 PTMSP20962 102 aa11.2□□□□□ -0.62
EPB41-201ENST00000343067 BCL11AQ9H165 835 aa11.19□□□□□ -0.62
EPB41-201ENST00000343067 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
EPB41-201ENST00000343067 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
EPB41-201ENST00000343067 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
EPB41-201ENST00000343067 SOGA1O94964 1423 aa11.16□□□□□ -0.62
EPB41-201ENST00000343067 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
EPB41-201ENST00000343067 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
EPB41-201ENST00000343067 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
EPB41-201ENST00000343067 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
EPB41-201ENST00000343067 PLPPR3Q6T4P5 718 aa11.12□□□□□ -0.63
EPB41-201ENST00000343067 TNIKQ9UKE5 1360 aa11.12□□□□□ -0.63
EPB41-201ENST00000343067 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
EPB41-201ENST00000343067 EEA1Q15075 1411 aa11.11□□□□□ -0.63
EPB41-201ENST00000343067 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
EPB41-201ENST00000343067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
EPB41-201ENST00000343067 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
EPB41-201ENST00000343067 BCANQ96GW7 911 aa11.05□□□□□ -0.64
EPB41-201ENST00000343067 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
EPB41-201ENST00000343067 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
EPB41-201ENST00000343067 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
EPB41-201ENST00000343067 SYNJ1O43426 1573 aa11.02□□□□□ -0.64
EPB41-201ENST00000343067 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
EPB41-201ENST00000343067 KIF21BO75037 1637 aa10.99□□□□□ -0.65
EPB41-201ENST00000343067 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
EPB41-201ENST00000343067 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
EPB41-201ENST00000343067 APPP05067 770 aa10.97□□□□□ -0.65
EPB41-201ENST00000343067 NBR1Q14596 966 aa10.96□□□□□ -0.65
EPB41-201ENST00000343067 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.66
EPB41-201ENST00000343067 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
EPB41-201ENST00000343067 LAS1LQ9Y4W2 734 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms