RNA–Protein interactions for RNA: ENST00000484615.5

RPL3-217, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 827 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-217ENST00000484615 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
RPL3-217ENST00000484615 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
RPL3-217ENST00000484615 ABCC9O60706 1549 aa27.46■■□□□ 1.99
RPL3-217ENST00000484615 NACADO15069 1562 aa26.47■■□□□ 1.83
RPL3-217ENST00000484615 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
RPL3-217ENST00000484615 ZCCHC6Q5VYS8 1495 aaKnown RBP26.43■■□□□ 1.82
RPL3-217ENST00000484615 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
RPL3-217ENST00000484615 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
RPL3-217ENST00000484615 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
RPL3-217ENST00000484615 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
RPL3-217ENST00000484615 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
RPL3-217ENST00000484615 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
RPL3-217ENST00000484615 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
RPL3-217ENST00000484615 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
RPL3-217ENST00000484615 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
RPL3-217ENST00000484615 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
RPL3-217ENST00000484615 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
RPL3-217ENST00000484615 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
RPL3-217ENST00000484615 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
RPL3-217ENST00000484615 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
RPL3-217ENST00000484615 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
RPL3-217ENST00000484615 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
RPL3-217ENST00000484615 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
RPL3-217ENST00000484615 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
RPL3-217ENST00000484615 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
RPL3-217ENST00000484615 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
RPL3-217ENST00000484615 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
RPL3-217ENST00000484615 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
RPL3-217ENST00000484615 WIZO95785 1651 aa24.12■■□□□ 1.45
RPL3-217ENST00000484615 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
RPL3-217ENST00000484615 NESP48681 1621 aa23.81■■□□□ 1.4
RPL3-217ENST00000484615 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
RPL3-217ENST00000484615 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
RPL3-217ENST00000484615 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
RPL3-217ENST00000484615 CFTRP13569 1480 aa23.62■■□□□ 1.37
RPL3-217ENST00000484615 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
RPL3-217ENST00000484615 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
RPL3-217ENST00000484615 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
RPL3-217ENST00000484615 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
RPL3-217ENST00000484615 CUX2O14529 1486 aa23.45■■□□□ 1.34
RPL3-217ENST00000484615 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
RPL3-217ENST00000484615 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
RPL3-217ENST00000484615 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
RPL3-217ENST00000484615 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
RPL3-217ENST00000484615 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
RPL3-217ENST00000484615 WDR62O43379 1518 aa23.29■■□□□ 1.32
RPL3-217ENST00000484615 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
RPL3-217ENST00000484615 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
RPL3-217ENST00000484615 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
RPL3-217ENST00000484615 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
RPL3-217ENST00000484615 CUX1P39880 1505 aa22.92■■□□□ 1.26
RPL3-217ENST00000484615 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
RPL3-217ENST00000484615 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
RPL3-217ENST00000484615 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
RPL3-217ENST00000484615 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
RPL3-217ENST00000484615 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
RPL3-217ENST00000484615 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
RPL3-217ENST00000484615 SOGA1O94964 1423 aa22.76■■□□□ 1.23
RPL3-217ENST00000484615 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.235e-6■□□□□ 8.4
RPL3-217ENST00000484615 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
RPL3-217ENST00000484615 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
RPL3-217ENST00000484615 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
RPL3-217ENST00000484615 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
RPL3-217ENST00000484615 AQRO60306 1485 aaKnown RBP eCLIP22.68■■□□□ 1.221e-8■■■■■ 27.7
RPL3-217ENST00000484615 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
RPL3-217ENST00000484615 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
RPL3-217ENST00000484615 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
RPL3-217ENST00000484615 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
RPL3-217ENST00000484615 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
RPL3-217ENST00000484615 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
RPL3-217ENST00000484615 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
RPL3-217ENST00000484615 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
RPL3-217ENST00000484615 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
RPL3-217ENST00000484615 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
RPL3-217ENST00000484615 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
RPL3-217ENST00000484615 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
RPL3-217ENST00000484615 CHD1O14646 1710 aa22.34■■□□□ 1.17
RPL3-217ENST00000484615 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
RPL3-217ENST00000484615 FBLN2P98095 1184 aa22.28■■□□□ 1.16
RPL3-217ENST00000484615 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
RPL3-217ENST00000484615 IGF1RP08069 1367 aa22.26■■□□□ 1.15
RPL3-217ENST00000484615 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
RPL3-217ENST00000484615 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
RPL3-217ENST00000484615 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
RPL3-217ENST00000484615 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
RPL3-217ENST00000484615 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
RPL3-217ENST00000484615 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
RPL3-217ENST00000484615 NUP160Q12769 1436 aa22.16■■□□□ 1.14
RPL3-217ENST00000484615 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
RPL3-217ENST00000484615 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
RPL3-217ENST00000484615 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
RPL3-217ENST00000484615 CUL7Q14999 1698 aa22.07■■□□□ 1.12
RPL3-217ENST00000484615 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
RPL3-217ENST00000484615 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
RPL3-217ENST00000484615 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
RPL3-217ENST00000484615 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
RPL3-217ENST00000484615 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
RPL3-217ENST00000484615 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
RPL3-217ENST00000484615 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
RPL3-217ENST00000484615 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms