RNA–Protein interactions for RNA: ENST00000479871.1

POLE3-204, Transcript of DNA polymerase epsilon 3, accessory subunit, humanhuman

TSL 2

Gene POLE3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3-204ENST00000479871 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
POLE3-204ENST00000479871 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
POLE3-204ENST00000479871 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
POLE3-204ENST00000479871 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
POLE3-204ENST00000479871 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
POLE3-204ENST00000479871 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
POLE3-204ENST00000479871 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
POLE3-204ENST00000479871 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
POLE3-204ENST00000479871 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
POLE3-204ENST00000479871 ABCC9O60706 1549 aa24.25■■□□□ 1.47
POLE3-204ENST00000479871 SCRIBQ14160 1630 aa24.08■■□□□ 1.44
POLE3-204ENST00000479871 NACADO15069 1562 aa24.03■■□□□ 1.44
POLE3-204ENST00000479871 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.42
POLE3-204ENST00000479871 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
POLE3-204ENST00000479871 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
POLE3-204ENST00000479871 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
POLE3-204ENST00000479871 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
POLE3-204ENST00000479871 HRCP23327 699 aa23.35■■□□□ 1.33
POLE3-204ENST00000479871 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
POLE3-204ENST00000479871 WIZO95785 1651 aa23.34■■□□□ 1.33
POLE3-204ENST00000479871 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
POLE3-204ENST00000479871 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
POLE3-204ENST00000479871 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
POLE3-204ENST00000479871 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
POLE3-204ENST00000479871 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
POLE3-204ENST00000479871 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
POLE3-204ENST00000479871 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
POLE3-204ENST00000479871 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
POLE3-204ENST00000479871 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
POLE3-204ENST00000479871 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.26
POLE3-204ENST00000479871 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
POLE3-204ENST00000479871 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
POLE3-204ENST00000479871 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
POLE3-204ENST00000479871 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
POLE3-204ENST00000479871 EEA1Q15075 1411 aa22.61■■□□□ 1.21
POLE3-204ENST00000479871 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
POLE3-204ENST00000479871 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
POLE3-204ENST00000479871 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
POLE3-204ENST00000479871 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
POLE3-204ENST00000479871 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
POLE3-204ENST00000479871 SOGA1O94964 1423 aa22.46■■□□□ 1.19
POLE3-204ENST00000479871 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
POLE3-204ENST00000479871 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
POLE3-204ENST00000479871 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
POLE3-204ENST00000479871 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
POLE3-204ENST00000479871 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
POLE3-204ENST00000479871 GOLGA3Q08378 1498 aa22.33■■□□□ 1.17
POLE3-204ENST00000479871 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.16
POLE3-204ENST00000479871 KIF21BO75037 1637 aa22.29■■□□□ 1.16
POLE3-204ENST00000479871 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
POLE3-204ENST00000479871 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
POLE3-204ENST00000479871 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
POLE3-204ENST00000479871 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
POLE3-204ENST00000479871 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
POLE3-204ENST00000479871 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
POLE3-204ENST00000479871 CLIP1P30622 1438 aa22■■□□□ 1.11
POLE3-204ENST00000479871 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
POLE3-204ENST00000479871 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
POLE3-204ENST00000479871 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
POLE3-204ENST00000479871 CFTRP13569 1480 aa21.94■■□□□ 1.1
POLE3-204ENST00000479871 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
POLE3-204ENST00000479871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
POLE3-204ENST00000479871 PRDM2Q13029 1718 aa21.91■■□□□ 1.1
POLE3-204ENST00000479871 CUX1P39880 1505 aa21.91■■□□□ 1.1
POLE3-204ENST00000479871 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
POLE3-204ENST00000479871 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
POLE3-204ENST00000479871 TTBK1Q5TCY1 1321 aaPredicted RBP21.77■■□□□ 1.08
POLE3-204ENST00000479871 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
POLE3-204ENST00000479871 APLP2Q06481 763 aa21.66■■□□□ 1.06
POLE3-204ENST00000479871 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
POLE3-204ENST00000479871 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
POLE3-204ENST00000479871 CUX2O14529 1486 aa21.53■■□□□ 1.04
POLE3-204ENST00000479871 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
POLE3-204ENST00000479871 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
POLE3-204ENST00000479871 IGF1RP08069 1367 aa21.5■■□□□ 1.03
POLE3-204ENST00000479871 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
POLE3-204ENST00000479871 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
POLE3-204ENST00000479871 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
POLE3-204ENST00000479871 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
POLE3-204ENST00000479871 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
POLE3-204ENST00000479871 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
POLE3-204ENST00000479871 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
POLE3-204ENST00000479871 CLSPNQ9HAW4 1339 aa21.42■■□□□ 1.02
POLE3-204ENST00000479871 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
POLE3-204ENST00000479871 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
POLE3-204ENST00000479871 KANK4Q5T7N3 995 aaPredicted RBP21.37■■□□□ 1.01
POLE3-204ENST00000479871 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
POLE3-204ENST00000479871 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
POLE3-204ENST00000479871 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
POLE3-204ENST00000479871 TOPBP1Q92547 1522 aa21.32■■□□□ 1
POLE3-204ENST00000479871 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
POLE3-204ENST00000479871 CUL7Q14999 1698 aa21.29■■□□□ 1
POLE3-204ENST00000479871 CCNB3Q8WWL7 1395 aa21.29■■□□□ 1
POLE3-204ENST00000479871 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
POLE3-204ENST00000479871 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
POLE3-204ENST00000479871 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
POLE3-204ENST00000479871 FHAD1B1AJZ9 1412 aa21.26■□□□□ 0.99
POLE3-204ENST00000479871 ACIN1Q9UKV3 1341 aaKnown RBP21.26■□□□□ 0.99
POLE3-204ENST00000479871 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
POLE3-204ENST00000479871 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms