RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
SH3PXD2A-204ENST00000420222 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
SH3PXD2A-204ENST00000420222 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
SH3PXD2A-204ENST00000420222 HRCP23327 699 aa25■■□□□ 1.59
SH3PXD2A-204ENST00000420222 PCGF6Q9BYE7 350 aa24.98■■□□□ 1.59
SH3PXD2A-204ENST00000420222 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.57
SH3PXD2A-204ENST00000420222 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
SH3PXD2A-204ENST00000420222 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
SH3PXD2A-204ENST00000420222 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
SH3PXD2A-204ENST00000420222 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
SH3PXD2A-204ENST00000420222 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
SH3PXD2A-204ENST00000420222 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
SH3PXD2A-204ENST00000420222 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
SH3PXD2A-204ENST00000420222 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
SH3PXD2A-204ENST00000420222 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
SH3PXD2A-204ENST00000420222 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.37
SH3PXD2A-204ENST00000420222 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
SH3PXD2A-204ENST00000420222 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
SH3PXD2A-204ENST00000420222 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
SH3PXD2A-204ENST00000420222 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
SH3PXD2A-204ENST00000420222 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
SH3PXD2A-204ENST00000420222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.31
SH3PXD2A-204ENST00000420222 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
SH3PXD2A-204ENST00000420222 NEUROD1Q13562 356 aa23.14■■□□□ 1.3
SH3PXD2A-204ENST00000420222 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
SH3PXD2A-204ENST00000420222 GTF3C3Q9Y5Q9 886 aa23.06■■□□□ 1.28
SH3PXD2A-204ENST00000420222 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
SH3PXD2A-204ENST00000420222 YTHDC1Q96MU7 727 aaKnown RBP22.93■■□□□ 1.26
SH3PXD2A-204ENST00000420222 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
SH3PXD2A-204ENST00000420222 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.26
SH3PXD2A-204ENST00000420222 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
SH3PXD2A-204ENST00000420222 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
SH3PXD2A-204ENST00000420222 ABCC9O60706 1549 aa22.85■■□□□ 1.25
SH3PXD2A-204ENST00000420222 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
SH3PXD2A-204ENST00000420222 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
SH3PXD2A-204ENST00000420222 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
SH3PXD2A-204ENST00000420222 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
SH3PXD2A-204ENST00000420222 MYT1Q01538 1121 aa22.42■■□□□ 1.18
SH3PXD2A-204ENST00000420222 MIER1Q8N108 512 aa22.4■■□□□ 1.18
SH3PXD2A-204ENST00000420222 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
SH3PXD2A-204ENST00000420222 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
SH3PXD2A-204ENST00000420222 WIZO95785 1651 aa22.3■■□□□ 1.16
SH3PXD2A-204ENST00000420222 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
SH3PXD2A-204ENST00000420222 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
SH3PXD2A-204ENST00000420222 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
SH3PXD2A-204ENST00000420222 SOGA1O94964 1423 aa22.15■■□□□ 1.14
SH3PXD2A-204ENST00000420222 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
SH3PXD2A-204ENST00000420222 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
SH3PXD2A-204ENST00000420222 APLP2Q06481 763 aa22.01■■□□□ 1.11
SH3PXD2A-204ENST00000420222 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
SH3PXD2A-204ENST00000420222 TNIKQ9UKE5 1360 aa21.96■■□□□ 1.11
SH3PXD2A-204ENST00000420222 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.1
SH3PXD2A-204ENST00000420222 BCANQ96GW7 911 aa21.87■■□□□ 1.09
SH3PXD2A-204ENST00000420222 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
SH3PXD2A-204ENST00000420222 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
SH3PXD2A-204ENST00000420222 ITGAEP38570 1179 aa21.78■■□□□ 1.08
SH3PXD2A-204ENST00000420222 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
SH3PXD2A-204ENST00000420222 CLIP1P30622 1438 aa21.74■■□□□ 1.07
SH3PXD2A-204ENST00000420222 NACADO15069 1562 aa21.73■■□□□ 1.07
SH3PXD2A-204ENST00000420222 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
SH3PXD2A-204ENST00000420222 TSHZ2Q9NRE2 1034 aa21.68■■□□□ 1.06
SH3PXD2A-204ENST00000420222 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
SH3PXD2A-204ENST00000420222 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
SH3PXD2A-204ENST00000420222 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
SH3PXD2A-204ENST00000420222 EEA1Q15075 1411 aa21.63■■□□□ 1.05
SH3PXD2A-204ENST00000420222 ANP32EQ9BTT0 268 aa21.56■■□□□ 1.04
SH3PXD2A-204ENST00000420222 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
SH3PXD2A-204ENST00000420222 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
SH3PXD2A-204ENST00000420222 FKBP8Q14318 412 aa21.54■■□□□ 1.04
SH3PXD2A-204ENST00000420222 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
SH3PXD2A-204ENST00000420222 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.03
SH3PXD2A-204ENST00000420222 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
SH3PXD2A-204ENST00000420222 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
SH3PXD2A-204ENST00000420222 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
SH3PXD2A-204ENST00000420222 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
SH3PXD2A-204ENST00000420222 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
SH3PXD2A-204ENST00000420222 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
SH3PXD2A-204ENST00000420222 TRIM52Q96A61 297 aa21.4■■□□□ 1.02
SH3PXD2A-204ENST00000420222 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SH3PXD2A-204ENST00000420222 NEFLP07196 543 aa21.37■■□□□ 1.01
SH3PXD2A-204ENST00000420222 KIF21BO75037 1637 aa21.34■■□□□ 1.01
SH3PXD2A-204ENST00000420222 ATP1B4Q9UN42 357 aaPredicted RBP21.28■■□□□ 1
SH3PXD2A-204ENST00000420222 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
SH3PXD2A-204ENST00000420222 RBM19Q9Y4C8 960 aaKnown RBP21.24■□□□□ 0.99
SH3PXD2A-204ENST00000420222 IRX6P78412 446 aaPredicted RBP21.23■□□□□ 0.99
SH3PXD2A-204ENST00000420222 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
SH3PXD2A-204ENST00000420222 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
SH3PXD2A-204ENST00000420222 CCNB3Q8WWL7 1395 aa21.16■□□□□ 0.98
SH3PXD2A-204ENST00000420222 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
SH3PXD2A-204ENST00000420222 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
SH3PXD2A-204ENST00000420222 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
SH3PXD2A-204ENST00000420222 ANP32CO43423 234 aa21.1■□□□□ 0.97
SH3PXD2A-204ENST00000420222 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
SH3PXD2A-204ENST00000420222 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
SH3PXD2A-204ENST00000420222 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
SH3PXD2A-204ENST00000420222 RRBP1Q9P2E9 1410 aaKnown RBP21.01■□□□□ 0.95
SH3PXD2A-204ENST00000420222 MSH5O43196 834 aa20.99■□□□□ 0.95
SH3PXD2A-204ENST00000420222 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.952e-6■■□□□ 12.3
SH3PXD2A-204ENST00000420222 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
SH3PXD2A-204ENST00000420222 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms