RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 NISCHQ9Y2I1 1504 aa43.22■■■■■ 4.51
CTSB-226ENST00000532656 ABCC9O60706 1549 aa39.01■■■■□ 3.84
CTSB-226ENST00000532656 CCDC180Q9P1Z9 1646 aa38.83■■■■□ 3.81
CTSB-226ENST00000532656 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
CTSB-226ENST00000532656 NACADO15069 1562 aa36.73■■■■□ 3.47
CTSB-226ENST00000532656 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
CTSB-226ENST00000532656 DCAF8L2P0C7V8 631 aa36.58■■■■□ 3.45
CTSB-226ENST00000532656 PABPN1Q86U42 306 aaKnown RBP eCLIP36.29■■■■□ 3.4
CTSB-226ENST00000532656 UNC13AQ9UPW8 1703 aa36.23■■■■□ 3.39
CTSB-226ENST00000532656 MYO15BQ96JP2 1530 aa36.14■■■■□ 3.38
CTSB-226ENST00000532656 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
CTSB-226ENST00000532656 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
CTSB-226ENST00000532656 DCAF1Q9Y4B6 1507 aa35.66■■■■□ 3.3
CTSB-226ENST00000532656 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
CTSB-226ENST00000532656 SHROOM4Q9ULL8 1493 aa35.41■■■■□ 3.26
CTSB-226ENST00000532656 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
CTSB-226ENST00000532656 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
CTSB-226ENST00000532656 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
CTSB-226ENST00000532656 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
CTSB-226ENST00000532656 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3
CTSB-226ENST00000532656 SMARCA4P51532 1647 aa33.76■■■■□ 3
CTSB-226ENST00000532656 DNAJC5Q9H3Z4 198 aa33.74■■■□□ 2.99
CTSB-226ENST00000532656 SMARCA2P51531 1590 aa33.7■■■□□ 2.99
CTSB-226ENST00000532656 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
CTSB-226ENST00000532656 HMGXB3Q12766 1538 aa33.66■■■□□ 2.98
CTSB-226ENST00000532656 CUX2O14529 1486 aa33.63■■■□□ 2.97
CTSB-226ENST00000532656 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
CTSB-226ENST00000532656 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
CTSB-226ENST00000532656 NESP48681 1621 aa33.48■■■□□ 2.95
CTSB-226ENST00000532656 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
CTSB-226ENST00000532656 MROH2BQ7Z745 1585 aa33.33■■■□□ 2.93
CTSB-226ENST00000532656 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
CTSB-226ENST00000532656 THOC2Q8NI27 1593 aaKnown RBP33.15■■■□□ 2.9
CTSB-226ENST00000532656 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
CTSB-226ENST00000532656 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
CTSB-226ENST00000532656 WIZO95785 1651 aa32.94■■■□□ 2.86
CTSB-226ENST00000532656 CADPSQ9ULU8 1353 aa32.88■■■□□ 2.85
CTSB-226ENST00000532656 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
CTSB-226ENST00000532656 WDR62O43379 1518 aa32.65■■■□□ 2.82
CTSB-226ENST00000532656 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
CTSB-226ENST00000532656 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
CTSB-226ENST00000532656 FANCD2Q9BXW9 1451 aa32.54■■■□□ 2.8
CTSB-226ENST00000532656 TOP2AP11388 1531 aaKnown RBP32.49■■■□□ 2.79
CTSB-226ENST00000532656 CFTRP13569 1480 aa32.48■■■□□ 2.79
CTSB-226ENST00000532656 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
CTSB-226ENST00000532656 TRIM41Q8WV44 630 aa32.28■■■□□ 2.76
CTSB-226ENST00000532656 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
CTSB-226ENST00000532656 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
CTSB-226ENST00000532656 OSCARQ8IYS5 282 aa32.06■■■□□ 2.72
CTSB-226ENST00000532656 ZNF608Q9ULD9 1512 aaPredicted RBP31.92■■■□□ 2.7
CTSB-226ENST00000532656 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
CTSB-226ENST00000532656 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
CTSB-226ENST00000532656 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
CTSB-226ENST00000532656 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
CTSB-226ENST00000532656 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
CTSB-226ENST00000532656 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
CTSB-226ENST00000532656 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
CTSB-226ENST00000532656 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
CTSB-226ENST00000532656 TARBP1Q13395 1621 aaKnown RBP31.63■■■□□ 2.65
CTSB-226ENST00000532656 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.652e-8■■■■■ 40.1
CTSB-226ENST00000532656 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
CTSB-226ENST00000532656 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
CTSB-226ENST00000532656 CHD1O14646 1710 aa31.53■■■□□ 2.64
CTSB-226ENST00000532656 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
CTSB-226ENST00000532656 FBLN2P98095 1184 aa31.44■■■□□ 2.62
CTSB-226ENST00000532656 SOGA1O94964 1423 aa31.42■■■□□ 2.62
CTSB-226ENST00000532656 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
CTSB-226ENST00000532656 FGD5Q6ZNL6 1462 aa31.37■■■□□ 2.61
CTSB-226ENST00000532656 CYB5RLQ6IPT4 315 aa31.36■■■□□ 2.61
CTSB-226ENST00000532656 CUX1P39880 1505 aa31.33■■■□□ 2.61
CTSB-226ENST00000532656 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
CTSB-226ENST00000532656 ARAP1Q96P48 1450 aa31.27■■■□□ 2.6
CTSB-226ENST00000532656 WDR97A6NE52 1622 aa31.26■■■□□ 2.59
CTSB-226ENST00000532656 MAGI1Q96QZ7 1491 aaPredicted RBP31.16■■■□□ 2.58
CTSB-226ENST00000532656 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
CTSB-226ENST00000532656 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
CTSB-226ENST00000532656 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
CTSB-226ENST00000532656 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
CTSB-226ENST00000532656 SUPT5HO00267 1087 aaKnown RBP31.09■■■□□ 2.57
CTSB-226ENST00000532656 SYNJ2O15056 1496 aa31.07■■■□□ 2.56
CTSB-226ENST00000532656 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
CTSB-226ENST00000532656 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
CTSB-226ENST00000532656 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
CTSB-226ENST00000532656 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
CTSB-226ENST00000532656 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
CTSB-226ENST00000532656 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
CTSB-226ENST00000532656 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
CTSB-226ENST00000532656 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
CTSB-226ENST00000532656 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
CTSB-226ENST00000532656 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
CTSB-226ENST00000532656 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
CTSB-226ENST00000532656 ERCC6L2Q5T890 1561 aa30.68■■■□□ 2.5
CTSB-226ENST00000532656 NUP160Q12769 1436 aa30.65■■■□□ 2.5
CTSB-226ENST00000532656 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
CTSB-226ENST00000532656 ERICH3Q5RHP9 1530 aa30.59■■■□□ 2.49
CTSB-226ENST00000532656 SHROOM2Q13796 1616 aa30.54■■■□□ 2.48
CTSB-226ENST00000532656 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.45
CTSB-226ENST00000532656 JPH4Q96JJ6 628 aa30.34■■■□□ 2.45
CTSB-226ENST00000532656 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
CTSB-226ENST00000532656 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms