RNA–Protein interactions for RNA: ENST00000466801.5

PTMA-209, Transcript of prothymosin alpha, humanhuman

TSL 5

Gene PTMA, Length 784 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-209ENST00000466801 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
PTMA-209ENST00000466801 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
PTMA-209ENST00000466801 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
PTMA-209ENST00000466801 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
PTMA-209ENST00000466801 NISCHQ9Y2I1 1504 aa25.8■■□□□ 1.72
PTMA-209ENST00000466801 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
PTMA-209ENST00000466801 FOXD1Q16676 465 aa24.33■■□□□ 1.49
PTMA-209ENST00000466801 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
PTMA-209ENST00000466801 ADRA2BP18089 450 aa23.43■■□□□ 1.34
PTMA-209ENST00000466801 ABCC9O60706 1549 aa23.25■■□□□ 1.31
PTMA-209ENST00000466801 PIAS4Q8N2W9 510 aaPredicted RBP22.95■■□□□ 1.26
PTMA-209ENST00000466801 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
PTMA-209ENST00000466801 MSH5O43196 834 aa22.43■■□□□ 1.18
PTMA-209ENST00000466801 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
PTMA-209ENST00000466801 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
PTMA-209ENST00000466801 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
PTMA-209ENST00000466801 NACADO15069 1562 aa21.78■■□□□ 1.08
PTMA-209ENST00000466801 PABPN1Q86U42 306 aaKnown RBP eCLIP21.74■■□□□ 1.07
PTMA-209ENST00000466801 PPP4R3CPQ6ZMV5 832 aa21.73■■□□□ 1.07
PTMA-209ENST00000466801 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
PTMA-209ENST00000466801 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
PTMA-209ENST00000466801 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
PTMA-209ENST00000466801 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
PTMA-209ENST00000466801 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
PTMA-209ENST00000466801 KCNA4P22459 653 aa21.33■■□□□ 1.01
PTMA-209ENST00000466801 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
PTMA-209ENST00000466801 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
PTMA-209ENST00000466801 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
PTMA-209ENST00000466801 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
PTMA-209ENST00000466801 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
PTMA-209ENST00000466801 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
PTMA-209ENST00000466801 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
PTMA-209ENST00000466801 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
PTMA-209ENST00000466801 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
PTMA-209ENST00000466801 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
PTMA-209ENST00000466801 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
PTMA-209ENST00000466801 RNF216Q9NWF9 866 aaPredicted RBP20.71■□□□□ 0.91
PTMA-209ENST00000466801 HOXD11P31277 338 aaPredicted RBP20.61■□□□□ 0.89
PTMA-209ENST00000466801 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
PTMA-209ENST00000466801 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
PTMA-209ENST00000466801 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
PTMA-209ENST00000466801 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
PTMA-209ENST00000466801 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
PTMA-209ENST00000466801 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
PTMA-209ENST00000466801 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
PTMA-209ENST00000466801 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
PTMA-209ENST00000466801 CUX2O14529 1486 aa19.97■□□□□ 0.79
PTMA-209ENST00000466801 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
PTMA-209ENST00000466801 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
PTMA-209ENST00000466801 NESP48681 1621 aa19.94■□□□□ 0.78
PTMA-209ENST00000466801 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
PTMA-209ENST00000466801 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
PTMA-209ENST00000466801 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
PTMA-209ENST00000466801 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
PTMA-209ENST00000466801 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
PTMA-209ENST00000466801 WIZO95785 1651 aa19.78■□□□□ 0.76
PTMA-209ENST00000466801 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
PTMA-209ENST00000466801 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
PTMA-209ENST00000466801 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
PTMA-209ENST00000466801 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
PTMA-209ENST00000466801 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
PTMA-209ENST00000466801 ZBTB22O15209 634 aa19.63■□□□□ 0.73
PTMA-209ENST00000466801 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
PTMA-209ENST00000466801 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
PTMA-209ENST00000466801 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
PTMA-209ENST00000466801 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
PTMA-209ENST00000466801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.721e-12■■■■□ 25.6
PTMA-209ENST00000466801 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
PTMA-209ENST00000466801 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
PTMA-209ENST00000466801 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
PTMA-209ENST00000466801 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
PTMA-209ENST00000466801 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
PTMA-209ENST00000466801 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PTMA-209ENST00000466801 WDR62O43379 1518 aa19.35■□□□□ 0.69
PTMA-209ENST00000466801 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
PTMA-209ENST00000466801 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
PTMA-209ENST00000466801 CFTRP13569 1480 aa19.3■□□□□ 0.68
PTMA-209ENST00000466801 U3KPZ7 1027 aaPredicted RBP19.29■□□□□ 0.68
PTMA-209ENST00000466801 RNF39Q9H2S5 420 aa19.23■□□□□ 0.67
PTMA-209ENST00000466801 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
PTMA-209ENST00000466801 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
PTMA-209ENST00000466801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
PTMA-209ENST00000466801 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
PTMA-209ENST00000466801 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
PTMA-209ENST00000466801 SAMD1Q6SPF0 538 aaPredicted RBP19.04■□□□□ 0.64
PTMA-209ENST00000466801 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
PTMA-209ENST00000466801 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
PTMA-209ENST00000466801 ATXN8OSP0DMR3 200 aa18.99■□□□□ 0.63
PTMA-209ENST00000466801 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
PTMA-209ENST00000466801 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
PTMA-209ENST00000466801 APLP2Q06481 763 aa18.89■□□□□ 0.61
PTMA-209ENST00000466801 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
PTMA-209ENST00000466801 FBLN2P98095 1184 aa18.86■□□□□ 0.61
PTMA-209ENST00000466801 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.614e-20■■■■■ 37.2
PTMA-209ENST00000466801 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
PTMA-209ENST00000466801 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
PTMA-209ENST00000466801 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
PTMA-209ENST00000466801 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
PTMA-209ENST00000466801 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
PTMA-209ENST00000466801 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms