RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
CTSB-221ENST00000531502 ABCC9O60706 1549 aa32.97■■■□□ 2.87
CTSB-221ENST00000531502 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
CTSB-221ENST00000531502 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
CTSB-221ENST00000531502 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
CTSB-221ENST00000531502 NACADO15069 1562 aa31.08■■■□□ 2.57
CTSB-221ENST00000531502 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
CTSB-221ENST00000531502 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
CTSB-221ENST00000531502 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
CTSB-221ENST00000531502 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
CTSB-221ENST00000531502 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
CTSB-221ENST00000531502 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
CTSB-221ENST00000531502 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
CTSB-221ENST00000531502 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
CTSB-221ENST00000531502 SCRIBQ14160 1630 aa29.88■■■□□ 2.37
CTSB-221ENST00000531502 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
CTSB-221ENST00000531502 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
CTSB-221ENST00000531502 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
CTSB-221ENST00000531502 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
CTSB-221ENST00000531502 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
CTSB-221ENST00000531502 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
CTSB-221ENST00000531502 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
CTSB-221ENST00000531502 CUX2O14529 1486 aa28.48■■■□□ 2.15
CTSB-221ENST00000531502 SMARCA2P51531 1590 aa28.47■■■□□ 2.15
CTSB-221ENST00000531502 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
CTSB-221ENST00000531502 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
CTSB-221ENST00000531502 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
CTSB-221ENST00000531502 NESP48681 1621 aa28.3■■■□□ 2.12
CTSB-221ENST00000531502 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
CTSB-221ENST00000531502 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
CTSB-221ENST00000531502 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
CTSB-221ENST00000531502 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
CTSB-221ENST00000531502 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
CTSB-221ENST00000531502 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
CTSB-221ENST00000531502 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
CTSB-221ENST00000531502 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
CTSB-221ENST00000531502 WIZO95785 1651 aa27.79■■■□□ 2.04
CTSB-221ENST00000531502 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
CTSB-221ENST00000531502 WDR62O43379 1518 aa27.62■■■□□ 2.01
CTSB-221ENST00000531502 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
CTSB-221ENST00000531502 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
CTSB-221ENST00000531502 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
CTSB-221ENST00000531502 CFTRP13569 1480 aa27.48■■□□□ 1.99
CTSB-221ENST00000531502 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
CTSB-221ENST00000531502 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
CTSB-221ENST00000531502 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
CTSB-221ENST00000531502 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
CTSB-221ENST00000531502 OSCARQ8IYS5 282 aa27.14■■□□□ 1.94
CTSB-221ENST00000531502 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
CTSB-221ENST00000531502 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
CTSB-221ENST00000531502 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
CTSB-221ENST00000531502 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
CTSB-221ENST00000531502 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
CTSB-221ENST00000531502 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
CTSB-221ENST00000531502 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.88
CTSB-221ENST00000531502 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.88
CTSB-221ENST00000531502 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.88
CTSB-221ENST00000531502 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
CTSB-221ENST00000531502 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
CTSB-221ENST00000531502 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
CTSB-221ENST00000531502 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.872e-8■■■■■ 40.1
CTSB-221ENST00000531502 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
CTSB-221ENST00000531502 CHD1O14646 1710 aa26.63■■□□□ 1.85
CTSB-221ENST00000531502 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
CTSB-221ENST00000531502 SOGA1O94964 1423 aa26.54■■□□□ 1.84
CTSB-221ENST00000531502 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
CTSB-221ENST00000531502 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
CTSB-221ENST00000531502 FBLN2P98095 1184 aa26.48■■□□□ 1.83
CTSB-221ENST00000531502 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
CTSB-221ENST00000531502 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
CTSB-221ENST00000531502 CUX1P39880 1505 aa26.45■■□□□ 1.83
CTSB-221ENST00000531502 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
CTSB-221ENST00000531502 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
CTSB-221ENST00000531502 CLASP1Q7Z460 1538 aa26.35■■□□□ 1.81
CTSB-221ENST00000531502 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
CTSB-221ENST00000531502 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
CTSB-221ENST00000531502 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
CTSB-221ENST00000531502 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
CTSB-221ENST00000531502 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
CTSB-221ENST00000531502 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
CTSB-221ENST00000531502 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
CTSB-221ENST00000531502 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
CTSB-221ENST00000531502 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
CTSB-221ENST00000531502 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
CTSB-221ENST00000531502 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
CTSB-221ENST00000531502 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
CTSB-221ENST00000531502 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
CTSB-221ENST00000531502 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
CTSB-221ENST00000531502 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
CTSB-221ENST00000531502 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
CTSB-221ENST00000531502 NUP160Q12769 1436 aa25.94■■□□□ 1.74
CTSB-221ENST00000531502 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
CTSB-221ENST00000531502 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
CTSB-221ENST00000531502 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
CTSB-221ENST00000531502 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
CTSB-221ENST00000531502 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
CTSB-221ENST00000531502 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
CTSB-221ENST00000531502 JPH4Q96JJ6 628 aa25.64■■□□□ 1.7
CTSB-221ENST00000531502 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
CTSB-221ENST00000531502 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms